RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 GJD3Q8N144 294 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 DMGDHQ9UI17 866 aaKnown RBP10.18□□□□□ -0.78
CXCR4-201ENST00000241393 PCDHGC4Q9Y5F7 938 aa10.18□□□□□ -0.78
CXCR4-201ENST00000241393 QRICH2Q9H0J4 1663 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 ATXN7O15265 892 aaPredicted RBP10.17□□□□□ -0.78
CXCR4-201ENST00000241393 INPP5BP32019 993 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 ATP2B2Q01814 1243 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 LAMC2Q13753 1193 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 EAPPQ56P03 285 aaPredicted RBP10.17□□□□□ -0.78
CXCR4-201ENST00000241393 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 CCDC155Q8N6L0 562 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
CXCR4-201ENST00000241393 FAM129BQ96TA1 746 aa10.17□□□□□ -0.78
CXCR4-201ENST00000241393 NSD2O96028 1365 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 FAM157BP0CG42 384 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 TYRO3Q06418 890 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 GGT6Q6P531 493 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 ALKBH8Q96BT7 664 aaKnown RBP10.16□□□□□ -0.78
CXCR4-201ENST00000241393 DACH1Q9UI36 760 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 RTCBQ9Y3I0 505 aaKnown RBP10.16□□□□□ -0.78
CXCR4-201ENST00000241393 GLI2P10070 1586 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 NEXMIFQ5QGS0 1516 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 RICTORQ6R327 1708 aa10.16□□□□□ -0.78
CXCR4-201ENST00000241393 RBM47A0AV96 593 aaKnown RBP10.15□□□□□ -0.78
CXCR4-201ENST00000241393 E9PSI1 815 aa10.15□□□□□ -0.78
CXCR4-201ENST00000241393 NPAS4Q8IUM7 802 aa10.15□□□□□ -0.78
CXCR4-201ENST00000241393 CMTR1Q8N1G2 835 aaKnown RBP10.15□□□□□ -0.78
CXCR4-201ENST00000241393 BRD7Q9NPI1 651 aa10.15□□□□□ -0.78
CXCR4-201ENST00000241393 SLC52A1Q9NWF4 448 aa10.15□□□□□ -0.78
CXCR4-201ENST00000241393 NINLQ9Y2I6 1382 aa10.15□□□□□ -0.78
CXCR4-201ENST00000241393 TREHO43280 583 aa10.15□□□□□ -0.79
CXCR4-201ENST00000241393 PDE12Q6L8Q7 609 aaKnown RBP10.15□□□□□ -0.79
CXCR4-201ENST00000241393 TRERF1Q96PN7 1200 aa10.15□□□□□ -0.79
CXCR4-201ENST00000241393 CRBNQ96SW2 442 aa10.15□□□□□ -0.79
CXCR4-201ENST00000241393 EFCC1Q9HA90 598 aa10.15□□□□□ -0.79
CXCR4-201ENST00000241393 GMPR2Q9P2T1 348 aaKnown RBP10.15□□□□□ -0.79
CXCR4-201ENST00000241393 KCNH4Q9UQ05 1017 aa10.15□□□□□ -0.79
CXCR4-201ENST00000241393 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.79
CXCR4-201ENST00000241393 NKTRP30414 1462 aaKnown RBP10.15□□□□□ -0.79
CXCR4-201ENST00000241393 NSD3Q9BZ95 1437 aa10.14□□□□□ -0.79
CXCR4-201ENST00000241393 OPLAHO14841 1288 aa10.14□□□□□ -0.79
CXCR4-201ENST00000241393 IPO9Q96P70 1041 aaKnown RBP10.14□□□□□ -0.79
CXCR4-201ENST00000241393 ZCCHC2Q9C0B9 1178 aaKnown RBP10.14□□□□□ -0.79
CXCR4-201ENST00000241393 SIGLEC1Q9BZZ2 1709 aa10.14□□□□□ -0.79
CXCR4-201ENST00000241393 SOBPA7XYQ1 873 aa10.13□□□□□ -0.79
CXCR4-201ENST00000241393 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
CXCR4-201ENST00000241393 FAM26DQ5JW98 314 aa10.13□□□□□ -0.79
CXCR4-201ENST00000241393 TRAK1Q9UPV9 953 aa10.13□□□□□ -0.79
CXCR4-201ENST00000241393 EVC2Q86UK5 1308 aa10.13□□□□□ -0.79
CXCR4-201ENST00000241393 ANKRD36BQ8N2N9 1353 aa10.13□□□□□ -0.79
CXCR4-201ENST00000241393 ARHGEF28Q8N1W1 1705 aaKnown RBP10.13□□□□□ -0.79
CXCR4-201ENST00000241393 APAF1O14727 1248 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 ITGA6P23229 1130 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 RBM25P49756 843 aaKnown RBP10.12□□□□□ -0.79
CXCR4-201ENST00000241393 KCNQ4P56696 695 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 CENPQQ7L2Z9 268 aaPredicted RBP10.12□□□□□ -0.79
CXCR4-201ENST00000241393 ZNF438Q7Z4V0 828 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 CGNL1Q0VF96 1302 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 KDM2BQ8NHM5 1336 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 PLIN1O60240 522 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 XKR5Q6UX68 686 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 MORC1Q86VD1 984 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 GIPC2Q8TF65 315 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
CXCR4-201ENST00000241393 KHNYNO15037 678 aaKnown RBP10.11□□□□□ -0.79
CXCR4-201ENST00000241393 FMR1Q06787 632 aaKnown RBP eCLIP10.11□□□□□ -0.79
CXCR4-201ENST00000241393 PMEPA1Q969W9 287 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 DNAJC25Q9H1X3 360 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 ATXN7L1Q9ULK2 861 aaPredicted RBP10.11□□□□□ -0.79
CXCR4-201ENST00000241393 TULP4Q9NRJ4 1543 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 REREQ9P2R6 1566 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 RIMBP3CA6NJZ7 1639 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 RIMBP3BA6NNM3 1639 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 RIMBP3Q9UFD9 1639 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 SHPRHQ149N8 1683 aa10.11□□□□□ -0.79
CXCR4-201ENST00000241393 XYLBO75191 536 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 RAPGEF3O95398 923 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 EGFRP00533 1210 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 MAPK8P45983 427 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 ALG1LQ6GMV1 187 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 SNX29Q8TEQ0 813 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 NIF3L1Q9GZT8 377 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 IQSEC2Q5JU85 1478 aa10.1□□□□□ -0.79
CXCR4-201ENST00000241393 CFAP65Q6ZU64 1925 aaKnown RBP10.1□□□□□ -0.79
CXCR4-201ENST00000241393 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 CFAP53Q96M91 514 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 PNMA5Q96PV4 448 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 PREX1Q8TCU6 1659 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 TMEM131LA2VDJ0 1609 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 PDE3AQ14432 1141 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 DSC3Q14574 896 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 TTC39BQ5VTQ0 682 aaPredicted RBP10.09□□□□□ -0.79
CXCR4-201ENST00000241393 CCDC146Q8IYE0 955 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 MARK1Q9P0L2 795 aa10.09□□□□□ -0.79
CXCR4-201ENST00000241393 AGLP35573 1532 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 GPR182O15218 404 aa10.08□□□□□ -0.8
CXCR4-201ENST00000241393 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms