RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 ZNF34Q8IZ26 560 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 NME8Q8N427 588 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 TSR2Q969E8 191 aaKnown RBP4.45□□□□□ -1.7
UFM1-201ENST00000239878 DNAJC2Q99543 621 aaKnown RBP4.45□□□□□ -1.7
UFM1-201ENST00000239878 MTFR1LQ9H019 292 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 METTL14Q9HCE5 456 aaKnown RBP4.45□□□□□ -1.7
UFM1-201ENST00000239878 FER1L6Q2WGJ9 1857 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 MAP3K15Q6ZN16 1313 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 UBN2Q6ZU65 1347 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 PLCG2P16885 1265 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 CAPN2P17655 700 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 SERPINB4P48594 390 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 CASP7P55210 303 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 TRIM28Q13263 835 aaKnown RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 SF3B2Q13435 895 aaKnown RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 TCEAL1Q15170 157 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 ECM1Q16610 540 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 ALDH1L2Q3SY69 923 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 AXDND1Q5T1B0 1012 aaPredicted RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 XP32Q5T750 250 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 CCDC181Q5TID7 509 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 JARID2Q92833 1246 aaPredicted RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 CDCA7LQ96GN5 454 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 TRIM34Q9BYJ4 488 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 STK32BQ9NY57 414 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 CARMIL3Q8ND23 1372 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 ABCC4O15439 1325 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 CCDC194A0A1B0GVG4 234 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 TRIM6-TRIM34B2RNG4 842 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 PPFIA4O75335 1185 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 A1BGP04217 495 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 GOLGA2Q08379 1002 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 CCDC144BQ3MJ40 725 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 IFNL1Q8IU54 200 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 FAM9BQ8IZU0 186 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 MRPL50Q8N5N7 158 aaKnown RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 TRIM44Q96DX7 344 aaPredicted RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 ISCA1Q9BUE6 129 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 GEMIN8Q9NWZ8 242 aaKnown RBP4.44□□□□□ -1.7
UFM1-201ENST00000239878 RTL9Q8NET4 1388 aa4.44□□□□□ -1.7
UFM1-201ENST00000239878 A0A087WZG4 1122 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 STARD3NLO95772 234 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 MRE11P49959 708 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 TTC5Q8N0Z6 440 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 SYTL4Q96C24 671 aaPredicted RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 L3MBTL3Q96JM7 780 aaPredicted RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 PLCD4Q9BRC7 762 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 GRPEL1Q9HAV7 217 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 ABCC12Q96J65 1359 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 DYNC1I1O14576 645 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 PTCD1O75127 700 aaKnown RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 KCNA3P22001 575 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 ERCC5P28715 1186 aaPredicted RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 VAC14Q08AM6 782 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 R3HDM1Q15032 1099 aaKnown RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 QPCTQ16769 361 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 HSP90AB4PQ58FF6 505 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 TBC1D9Q6ZT07 1266 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 SMIM5Q71RC9 77 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 CHPF2Q9P2E5 772 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 PSME4Q14997 1843 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 FAM205CA6NFA0 338 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 NTSR2O95665 410 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 ARID4AP29374 1257 aaPredicted RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 EXOSC9Q06265 439 aaKnown RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 PTPROQ16827 1216 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 CRY2Q49AN0 593 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 SPTY2D1Q68D10 685 aaPredicted RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 RPUSD2Q8IZ73 545 aaKnown RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 BRINP2Q9C0B6 783 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 HYPKQ9NX55 129 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 DBF4Q9UBU7 674 aaPredicted RBP4.43□□□□□ -1.7
UFM1-201ENST00000239878 FAN1Q9Y2M0 1017 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 SH3BP1Q9Y3L3 701 aa4.43□□□□□ -1.7
UFM1-201ENST00000239878 TIAM2Q8IVF5 1701 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 LILRB3O75022 631 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 PHF14O94880 888 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 MCCP23508 829 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 RARSP54136 660 aaKnown RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 HLFQ16534 295 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 WASHC4Q2M389 1173 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 TWISTNBQ3B726 338 aaPredicted RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 SLC10A5Q5PT55 438 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 APBB1IPQ7Z5R6 666 aaPredicted RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 ZNF710Q8N1W2 664 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 PLBD2Q8NHP8 589 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 NLRP7Q8WX94 980 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 ARHGAP45Q92619 1136 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 PMM1Q92871 262 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 YY1AP1Q9H869 796 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 SRP68Q9UHB9 627 aaKnown RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 TMA7Q9Y2S6 64 aaKnown RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 RTCBQ9Y3I0 505 aaKnown RBP4.42□□□□□ -1.7
UFM1-201ENST00000239878 NDUFB9Q9Y6M9 179 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 PPP1R3GB7ZBB8 358 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 USP17L8P0C7I0 530 aa4.42□□□□□ -1.7
UFM1-201ENST00000239878 FOXK1P85037 733 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms