RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ERBB3P21860 1342 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 IGSF1Q8N6C5 1336 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 CRKLP46109 303 aaKnown RBP11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 DLGAP5Q15398 846 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 ZBTB38Q8NAP3 1195 aaPredicted RBP11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 AOX1Q06278 1338 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 SYCE3A1L190 88 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 KDRP35968 1356 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 IL6STP40189 918 aaPredicted RBP11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 TEX35Q5T0J7 233 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 SPATA31A3Q5VYP0 1347 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 FILIP1Q7Z7B0 1213 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 ZNF408Q9H9D4 720 aa11.88□□□□□ -0.51
NIPAL3-201ENST00000003912 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 CHMLP26374 656 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 DPY19L2Q6NUT2 758 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 FAM114A1Q8IWE2 563 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 KCNQ3O43525 872 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 USPL1Q5W0Q7 1092 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 BICD1Q96G01 975 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 ADCY10Q96PN6 1610 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 SYNMO15061 1565 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 ZMYM4Q5VZL5 1548 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 SSR1P43307 286 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 SEPT12Q8IYM1 358 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 SPA17Q15506 151 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 KCNG4Q8TDN1 519 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 TAF4BQ92750 862 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 ARMT1Q9H993 441 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 GRPEL1Q9HAV7 217 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 CLASP1Q7Z460 1538 aa11.87□□□□□ -0.51
NIPAL3-201ENST00000003912 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 MTIF2P46199 727 aaKnown RBP11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 TTLL7Q6ZT98 887 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 PANK2Q9BZ23 570 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 EXOC1Q9NV70 894 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 TNFAIP1Q13829 316 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 USP37Q86T82 979 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 IQCEQ6IPM2 695 aa11.86□□□□□ -0.51
NIPAL3-201ENST00000003912 KRT2P35908 639 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 TCERG1LQ5VWI1 586 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 CCDC174Q6PII3 467 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 TRIM75PA6NK02 468 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 ARHGAP29Q52LW3 1261 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 TMEM87BQ96K49 555 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 STAT6P42226 847 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 HSP90AA2PQ14568 343 aaPredicted RBP11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 KBTBD3Q8NAB2 608 aa11.85□□□□□ -0.51
NIPAL3-201ENST00000003912 TNPO1Q92973 898 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 GPAA1O43292 621 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 NCBP1Q09161 790 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 ARHGAP27Q6ZUM4 889 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 TEKT1Q969V4 418 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 DRC1Q96MC2 740 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 SFPQP23246 707 aaKnown RBP eCLIP11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 SYKP43405 635 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 APOBRQ0VD83 1088 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 STX1AQ16623 288 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 RUFY3Q7L099 469 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 CHST3Q7LGC8 479 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 ADGRL3Q9HAR2 1447 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 TOP1P11387 765 aaKnown RBP11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 UBE2HP62256 183 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 GTF2IP78347 998 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 KRT79Q5XKE5 535 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 TMC4Q7Z404 712 aa11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 BIN2Q9UBW5 565 aaPredicted RBP11.84□□□□□ -0.51
NIPAL3-201ENST00000003912 MFSD14BQ5SR56 506 aa11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 BLMP54132 1417 aaPredicted RBP11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 USP48Q86UV5 1035 aa11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 GLT8D2Q9H1C3 349 aa11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 IVNS1ABPQ9Y6Y0 642 aa11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 FBXO3Q9UK99 471 aa11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 TTF2Q9UNY4 1162 aaKnown RBP11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 EAPPQ56P03 285 aaPredicted RBP11.83□□□□□ -0.52
NIPAL3-201ENST00000003912 GIGYF2Q6Y7W6 1299 aaKnown RBP11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 FAM177A1Q8N128 213 aaPredicted RBP11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 YEATS4O95619 227 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 CAVIN2O95810 425 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 ZKSCAN3Q9BRR0 538 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 GPCPD1Q9NPB8 672 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms