RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Evi5P97366 809 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ano1Q8BHY3 960 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ppp1r37Q8BKR5 712 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 NsmfQ99NF2 532 aa10.12□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Pa2g4P50580 394 aaKnown RBP10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Amigo3Q8C2S7 508 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Polr3dQ91WD1 398 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ssr1Q9CY50 286 aaKnown RBP10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Surf1P09925 306 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Gtf2f1Q3THK3 508 aaKnown RBP10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Znf697Q569E7 569 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Znf526Q8BI66 675 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Q8BZJ8 459 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 PhaxQ9JJT9 385 aaKnown RBP10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Rad50P70388 1312 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc191J3QQ27 883 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Irx1P81068 480 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ubash3aQ3V3E1 624 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ddx49Q4FZF3 480 aaKnown RBP10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Panx2Q6IMP4 677 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cfap100Q80VN0 613 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Map3k11Q80XI6 850 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Dydc2Q9D3X8 139 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Xpo4Q9ESJ0 1151 aa10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cdk12Q14AX6 1484 aaKnown RBP10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Mybbp1aQ7TPV4 1344 aaKnown RBP10.11□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tpx2A2APB8 745 aaKnown RBP10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ppfia1B2RXQ2 1266 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Zbtb38Q3LR78 1197 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ppp1r21Q3TDD9 780 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Zswim4Q8C7B8 1101 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Calcoco1Q8CGU1 691 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Brd3Q8K2F0 726 aaKnown RBP10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tlcd1Q99JT6 247 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Myo5cE9Q1F5 1742 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Dip2bQ3UH60 1574 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Lig3P97386 1015 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Pde1cQ64338 706 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Smc2Q8CG48 1191 aaKnown RBP10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tmc2Q8R4P4 888 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Saal1Q9D2C2 474 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Mkrn1Q9QXP6 481 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Iqgap1Q9JKF1 1657 aaKnown RBP10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 MeiocA2AG06 965 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Pet2A2AHY8 747 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Zcwpw1Q6IR42 630 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc39Q9D5Y1 937 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Kdm5aQ3UXZ9 1690 aa10.1□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Pde11aP0C1Q2 933 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Rfc1P35601 1131 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Gas2l3Q3UWW6 683 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ehmt1Q5DW34 1296 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Fam53cQ8BXQ8 393 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Dnm3Q8BZ98 863 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 SnrkQ8VDU5 748 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ankrd1Q9CR42 319 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tbc1d7Q9D0K0 293 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 UvssaQ9D479 717 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cyp2ab1S4R196 498 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Kansl3A2RSY1 903 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Rsph10bE9PYQ0 876 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Casp1P29452 402 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cct4P80315 539 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Tbc1d30Q69ZT9 766 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 SarnpQ9D1J3 210 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 LratQ9JI60 231 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Hip1rQ9JKY5 1068 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cep152A2AUM9 1736 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ttll7A4Q9F0 912 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 1700113H08RikE9Q9Q5 327 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 H2afxP27661 143 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Cplx1P63040 134 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Bbof1Q3V079 533 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ccdc181Q80ZU5 509 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Phldb2Q8K1N2 1249 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 PpanQ91YU8 470 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 RarsQ9D0I9 660 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Speer4dL7N216 212 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Erlin2Q8BFZ9 340 aa10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Ptcd1Q8C2E4 695 aaKnown RBP10.09□□□□□ -0.79
Col28a1-201ENSMUST00000115537 Mcmdc2E9Q956 681 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Hspa2P17156 633 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ppfia3P60469 1194 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Tmem87bQ8BKU8 555 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Prc1Q99K43 603 aaKnown RBP10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Naa16Q9DBB4 864 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 SelenooQ9DBC0 667 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Bag3Q9JLV1 577 aaKnown RBP10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Bcl9Q9D219 1425 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Adamts7Q68SA9 1657 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 CemipQ8BI06 1361 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Zfp804bA0A0G2JGH6 1343 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rbm8a2A0A0N4SUH6 174 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Atp8b2P98199 1209 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Dok7Q18PE0 504 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cep63Q3UPP8 700 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ifit2Q64112 472 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Q8CEZ4 452 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Fam193aQ8CGI1 1231 aaKnown RBP10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Atf7Q8R0S1 413 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms