RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Myh4Q5SX39 1939 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Gm29094F6Q785 221 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Stat5bP42232 786 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Bloc1s2Q9CWG9 143 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 IcoslgQ9JHJ8 322 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Znf326O88291 580 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Ercc3P49135 783 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Olfm5Q8BU90 496 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Cep57l1Q8VDS7 400 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Tbc1d7Q9D0K0 293 aa30.46■■■□□ 2.47
Tpm1-216ENSMUST00000113707 A0A1W2P7S8 802 aa30.45■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Cdc5lQ6A068 802 aaKnown RBP30.45■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Pms1Q8K119 917 aa30.45■■■□□ 2.47
Tpm1-216ENSMUST00000113707 St5Q924W7 1134 aa30.45■■■□□ 2.47
Tpm1-216ENSMUST00000113707 Prdm11A2AGX3 565 aa30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Cyp2d34L7N463 504 aa30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Bms1Q6PGF5 1284 aaKnown RBP30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Tsr2Q8C8T8 191 aa30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Kcnn1Q9EQR3 537 aa30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Zbtb7aO88939 569 aaKnown RBP30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Ctdnep1Q3TP92 244 aa30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Iffo2Q8R2V2 512 aa30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Cnot6lQ8VEG6 555 aa30.44■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Tuft1O08970 390 aa30.43■■■□□ 2.46
Tpm1-216ENSMUST00000113707 CrcpO35427 148 aa30.43■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Pcdhb22Q91XZ8 794 aa30.43■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Arfgef1G3X9K3 1846 aaKnown RBP30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 ImpactO55091 318 aa30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Gnat2P50149 354 aa30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Usp48Q3V0C5 1052 aa30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Kcnq3Q8K3F6 873 aa30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Slc14a2Q8R4T9 930 aa30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 NaspQ99MD9 773 aaKnown RBP30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Slurp2P0DP59 97 aa30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Rbm15bQ6PHZ5 887 aaKnown RBP30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 CpzQ8R4V4 654 aa30.42■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Spryd3E9Q9B3 442 aa30.41■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Krt40Q6IFX3 439 aa30.41■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Slfn1Q9Z0I7 337 aa30.41■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Krt24A1L317 512 aa30.4■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Ppp1r21Q3TDD9 780 aa30.4■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Fam198bQ3UPI1 517 aa30.4■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Kif20aP97329 887 aa30.4■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Odf2lQ9D478 642 aa30.4■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Cyp3a59D3Z2W7 503 aa30.39■■■□□ 2.46
Tpm1-216ENSMUST00000113707 NapbP28663 298 aa30.39■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Cyp24a1Q64441 514 aa30.39■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Ces1dQ8VCT4 565 aa30.39■■■□□ 2.46
Tpm1-216ENSMUST00000113707 Rbbp6P97868 1790 aaKnown RBP30.39■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Gm5592Q3V0A6 857 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Nol12Q8BG17 217 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Cep55Q8BT07 462 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Rbm43Q99J64 343 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Cxcl11Q9JHH5 100 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 FAM186AQ9D9R9 1790 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Casp12O08736 419 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Siah1aP61092 282 aa30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Ccar2Q8VDP4 922 aaKnown RBP30.38■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Slc4a4O88343 1079 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Jdp2P97875 163 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Limch1Q3UH68 1057 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 1810065E05RikQ5NC41 235 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Acap3Q6NXL5 833 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Zfp113Q8C689 439 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Rufy2Q8R4C2 606 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Zbtb43Q9DAI4 467 aa30.37■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Mapkapk5O54992 473 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Psd3Q2PFD7 1037 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Fsd2Q8BZ52 692 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Letm1Q9Z2I0 738 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 EvplQ9D952 2035 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Wdr93Q402B2 695 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Smarcc2Q6PDG5 1213 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Me3Q8BMF3 604 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Krt84Q99M73 603 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 ZwintQ9CQU5 252 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Pold4Q9CWP8 107 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 UvssaQ9D479 717 aa30.36■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Atp6v0a2P15920 856 aa30.35■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Agtpbp1Q641K1 1218 aa30.35■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Glipr1l2Q9CQ35 332 aa30.35■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Leo1Q5XJE5 667 aa30.34■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Fsd1Q7TPM6 496 aa30.33■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Cfap69Q8BH53 942 aa30.33■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Eaf2Q91ZD6 262 aa30.33■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Mrpl12Q9DB15 201 aaKnown RBP30.33■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Ambra1A2AH22 1300 aa30.33■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Tmx3Q8BXZ1 456 aa30.33■■■□□ 2.45
Tpm1-216ENSMUST00000113707 Med23Q80YQ2 1367 aa30.32■■■□□ 2.44
Tpm1-216ENSMUST00000113707 NfixP70257 488 aa30.32■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Cct2P80314 535 aaKnown RBP30.32■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Ell2Q3UKU1 639 aa30.32■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Spg7Q3ULF4 781 aa30.32■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Ltn1Q6A009 1767 aa30.32■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Gadd45bP22339 160 aa30.31■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Wdhd1P59328 1117 aa30.31■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Bend4P86174 541 aa30.31■■■□□ 2.44
Tpm1-216ENSMUST00000113707 DpydQ8CHR6 1025 aa30.31■■■□□ 2.44
Tpm1-216ENSMUST00000113707 Gpr108Q91WD0 569 aa30.31■■■□□ 2.44
Tpm1-216ENSMUST00000113707 TrdnE9Q9K5 693 aa30.29■■■□□ 2.44
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms