RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 UvssaQ9D479 717 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Atp12aQ9Z1W8 1035 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Adamts7Q68SA9 1657 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Myo1bP46735 1107 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Aox2Q5SGK3 1345 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 NfkbibQ60778 359 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Adck5Q80V03 582 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Acnat2Q8BGG9 420 aa9.62□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Tnni2P13412 182 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Pafah1b1P63005 410 aaKnown RBP9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Tubb4bP68372 445 aaKnown RBP9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ift88Q61371 824 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ccdc93Q7TQK5 629 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Dis3l2Q8CI75 870 aaKnown RBP9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Trim34aQ99PP6 485 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Appbp2Q9DAX9 585 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 CrklP47941 303 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Cnnm2Q3TWN3 875 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Dusp9Q7TNL7 452 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Etf1Q8BWY3 437 aaKnown RBP9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Def6Q8C2K1 630 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ccdc73Q8CDM4 1066 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Hspd1P63038 573 aaKnown RBP9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Tacc1Q6Y685 774 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Tcp11l1Q8BTG3 509 aa9.61□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Wdr17E9Q271 1322 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Kcnf1Q7TSH7 493 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Slc35g1Q8BY79 368 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 GptQ8QZR5 496 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Npc1l1Q6T3U4 1333 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 ApobrQ8VBT6 942 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Vps16Q920Q4 839 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 InsrrQ9WTL4 1300 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Gm43638A0A0J9YU36 694 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Lnx1O70263 728 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 PsdQ5DTT2 1024 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Fam177a1Q8BR63 207 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Rapgef4Q9EQZ6 1011 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Kcnh3Q9WVJ0 1095 aa9.6□□□□□ -0.87
Bdnf-210ENSMUST00000111051 TsksO54887 585 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 SsbP32067 415 aaKnown RBP9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Tshz1Q5DTH5 1084 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ift122Q6NWV3 1182 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Nxf7Q80SZ6 620 aaKnown RBP9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ptcd1Q8C2E4 695 aaKnown RBP9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Sil1Q9EPK6 465 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 WtapQ9ER69 396 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Odf2A3KGV1 830 aaKnown RBP9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Speer4dL7N216 212 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Specc1lQ2KN98 1118 aaKnown RBP9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Ccz1Q8C1Y8 480 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Pcdhb15Q91Y04 786 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Plekho1Q9JIY0 408 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Uchl5Q9WUP7 329 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Pfkfb1P70266 471 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Larp6Q8BN59 492 aa9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Rbm33Q9CXK9 1231 aaKnown RBP9.59□□□□□ -0.87
Bdnf-210ENSMUST00000111051 Api5O35841 504 aaKnown RBP9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Cyp2d11P24457 504 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ankrd40Q5SUE8 363 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Cep131Q62036 1060 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Hip1rQ9JKY5 1068 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 DonsonQ9QXP4 560 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Atp1a4Q9WV27 1032 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 4930407I10RikD3Z5T8 1512 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Zfp597E9Q6S0 419 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Cdk4P30285 303 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Tubb5P99024 444 aaKnown RBP9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Iqsec3Q3TES0 1195 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Kri1Q8VDQ9 704 aaKnown RBP9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Tulp1Q9Z273 543 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Adcy9P51830 1353 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Samsn1P57725 372 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Slc7a3P70423 618 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Lrrfip1Q3UZ39 729 aaKnown RBP9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 ErmnQ5EBJ4 281 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Panx2Q6IMP4 677 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Tbc1d5Q80XQ2 815 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Aox4Q3TYQ9 1336 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Dip2aQ8BWT5 1523 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Gm20425E9Q035 978 aaKnown RBP9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 SrprbP47758 269 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Pde4dQ01063 747 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Kmt5bQ3U8K7 883 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Zbtb40Q6PCS8 1258 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Fam193aQ8CGI1 1231 aaKnown RBP9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ddx41Q91VN6 622 aaKnown RBP9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Cep89Q9CZX2 791 aa9.58□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Syde2E9PUP1 1314 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Gm42641I6L9G2 585 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 EmbP21995 330 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ctr9Q62018 1173 aaKnown RBP9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Txndc16Q7TN22 820 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 AtripQ8BMG1 785 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Rtn1Q8K0T0 780 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Creld2Q9CYA0 350 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Ercc6l2Q9JIM3 1537 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Usp42B2RQC2 1324 aaKnown RBP9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Mast3Q3U214 1321 aa9.57□□□□□ -0.88
Bdnf-210ENSMUST00000111051 Gm5624F6ZZG8 207 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms