RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Ktn1Q61595 1327 aaKnown RBP9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Map7d2A2AG50 781 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ccdc121E9Q6D3 323 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Dapk3O54784 448 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Gtf2f1Q3THK3 508 aaKnown RBP9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Asap2Q7SIG6 958 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Gigyf1Q99MR1 1044 aaKnown RBP9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Dusp10Q9ESS0 483 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Elf2Q9JHC9 593 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Clic4Q9QYB1 253 aa9.52□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Uri1Q3TLD5 531 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Znf653Q6YND2 615 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Dhx30Q99PU8 1217 aaKnown RBP9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Sil1Q9EPK6 465 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Zkscan5Q9Z1D8 819 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Gm21969J3QJZ1 289 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Trim34bJ3QNR8 485 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 NapbP28663 298 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ddx17Q501J6 650 aaKnown RBP9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Trim25Q61510 634 aaKnown RBP9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tsen34Q8BMZ5 316 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Vps18Q8R307 973 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Acsbg1Q99PU5 721 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ccdc39Q9D5Y1 937 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Sycp2lA0A0M3U1B0 842 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Eif5P59325 429 aaKnown RBP9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 CtifQ6PEE2 600 aaKnown RBP9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tmco3Q8BH01 678 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Fam43aQ8BUP8 424 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Rbm28Q8CGC6 750 aaKnown RBP9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ints4Q8CIM8 964 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Wasf1Q8R5H6 559 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tlcd1Q99JT6 247 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Arap3Q8R5G7 1538 aa9.51□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Gm43638A0A0J9YU36 694 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Fbxl16A2RT62 479 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Exosc10P56960 887 aaKnown RBP9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 L1td1Q587J6 782 aaKnown RBP9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 IqcgQ80W32 419 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Trim52Q8CDV4 233 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Trim59Q922Y2 403 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Pfkfb1P70266 471 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Zkscan8Q8BSL0 588 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Frat2Q8K025 231 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Nat10Q8K224 1024 aaKnown RBP9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Pcdhb22Q91XZ8 794 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 D430041D05RikF6ZGR6 1678 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 TfrcQ62351 763 aaKnown RBP9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Golph3lQ8R088 285 aaKnown RBP9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 ApobrQ8VBT6 942 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ncoa5Q91W39 579 aaKnown RBP9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tubb4aQ9D6F9 444 aa9.5□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tcof1O08784 1320 aaKnown RBP9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Gm20425E9Q035 978 aaKnown RBP9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Rgs9O54828 675 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 SrprbP47758 269 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Zhx1P70121 873 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tmem109Q3UBX0 243 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Prdm1Q60636 856 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tpm4Q6IRU2 248 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ube2oQ6ZPJ3 1288 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Hps3Q91VB4 1002 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Mei1Q9D4I2 1268 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Atp12aQ9Z1W8 1035 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Scn7aB1AYL1 1681 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ampd3O08739 766 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Serpinb6bO08804 377 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Cep63Q3UPP8 700 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Lamb3Q61087 1168 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Dhx40Q6PE54 779 aaKnown RBP9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Maats1Q8BRC6 783 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Lrrc2Q8VDB8 371 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ssfa2Q922B9 1252 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 4930548H24RikQ9D496 437 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 SelenooQ9DBC0 667 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 C5P06684 1680 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Cers3Q1A3B0 383 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Atg9aQ68FE2 551 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Klhl30Q8C3F7 581 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Chrna2Q91X60 512 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ciao1Q99KN2 339 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Baiap2l1Q9DBJ3 514 aa9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Telo2Q9DC40 840 aaKnown RBP9.49□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Anxa1P10107 346 aaKnown RBP9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Ftl2P49945 183 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Vgll3P85442 326 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Brd3Q8K2F0 726 aaKnown RBP9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Mrps25Q9D125 171 aaKnown RBP9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Fam84aQ9D650 292 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Dlg5E9Q9R9 1921 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 XpcP51612 930 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Znhit6Q3UFB2 460 aaKnown RBP9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 RgmbQ7TQ33 436 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Larp6Q8BN59 492 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 ZgpatQ8VDM1 511 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Iqca1Q9CUL5 857 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Tet3Q8BG87 1668 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Zscan20B2KFW1 1030 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Abl1P00520 1123 aa9.48□□□□□ -0.89
Bdnf-208ENSMUST00000111049 Samsn1P57725 372 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms