RNA–Protein interactions for RNA: ENSMUST00000100064.8

Scn9a-202, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Scn9a, Length 9,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-202ENSMUST00000100064 Ppfia1B2RXQ2 1266 aa11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Gm1043A0A140LJC2 1431 aa11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Calml3Q9D6P8 149 aa11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Cd274Q9EP73 290 aa11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Pram1Q6BCL1 675 aa11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Larp6Q8BN59 492 aa11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Rbm33Q9CXK9 1231 aaKnown RBP11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 AmfrQ9R049 643 aa11.7□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Mcm3P25206 812 aaKnown RBP11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Pla2g4fQ50L41 855 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Mettl24Q8CCB5 363 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Kdm5bQ80Y84 1544 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ccdc174Q3U155 467 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Rab34Q64008 259 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Nop56Q9D6Z1 580 aaKnown RBP11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ccdc185Q3V118 621 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Esco1Q69Z69 843 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ddx31Q6NZQ2 687 aaKnown RBP11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Srgap1Q91Z69 1062 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Prdm2A2A7B5 1709 aaKnown RBP11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Phf23Q8BSN5 401 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ythdc2B2RR83 1445 aaKnown RBP11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Gm10378F6XQQ1 160 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 MycbpapQ5SUV2 932 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 BlvraQ9CY64 295 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Tpcn1Q9EQJ0 817 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Speer2E9Q9U2 264 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Zap70P43404 618 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Grm1P97772 1199 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Apol7cQ8C6E1 369 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Tex19.1Q99MV2 351 aa11.69□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Rad50P70388 1312 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Syne3Q4FZC9 975 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Vps41Q5KU39 853 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Sall3Q62255 1320 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Jade3Q6IE82 823 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Gtpbp10Q8K013 366 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ccdc12Q8R344 166 aaKnown RBP11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Grin2aP35436 1464 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Klhl34A2AI76 644 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Otud7bB2RUR8 840 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ift122Q6NWV3 1182 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Tpx2A2APB8 745 aaKnown RBP11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Cdr1E9Q0B4 517 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 EvcP57680 1005 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ahcyl2Q68FL4 613 aaKnown RBP11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Actr5Q80US4 605 aaKnown RBP11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Cd2bp2Q9CWK3 342 aaKnown RBP11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Bnip3lQ9Z2F7 218 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 CltaO08585 235 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Spata18Q0P557 537 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 MpndQ3TV65 487 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 ThemisQ8BGW0 636 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Atp2a1Q8R429 994 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Dnajc10Q9DC23 793 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Supt6hQ62383 1726 aaKnown RBP11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Tnni3P48787 211 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Fam107bQ3TGF2 131 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Fam177a1Q8BR63 207 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ccdc189Q6NZQ0 333 aa11.68□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Nlrp1bA1Z198 1177 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Astn2Q80Z10 1352 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Spc25Q3UA16 226 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Psmd6Q99JI4 389 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Plcb3P51432 1234 aaKnown RBP11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ppfia3P60469 1194 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Brd3Q8K2F0 726 aaKnown RBP11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ccdc70Q9D9B0 223 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Akr1b8P45377 316 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ssh1Q76I79 1042 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Svs3bQ8BZH8 265 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Talpid3E9PV87 1520 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Stim2P83093 746 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Gpr161B2RPY5 545 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ccpg1Q640L3 753 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Crybg3Q80W49 1005 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Fyb2A2A995 729 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Slc18a1Q8R090 521 aa11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Rbm10Q99KG3 930 aaKnown RBP11.67□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Lamc3Q9R0B6 1581 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Eef2P58252 858 aaKnown RBP11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Aplp1Q03157 653 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Clul1Q3ZRW6 464 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Anapc5Q8BTZ4 740 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Scyl2Q8CFE4 930 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Gm38392E9Q2A2 434 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 YwhaeP62259 255 aaKnown RBP11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Cct8l1Q80YT3 562 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Snw1Q9CSN1 536 aaKnown RBP11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Atp6v1e2Q9D593 226 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Cage1Q5IR70 849 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Bicdl2Q8CHW5 507 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Fancd2Q80V62 1450 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Arhgef10lA2AWP8 1280 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 1700006A11RikB9EHI3 544 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 OscarQ8VBT3 265 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Atxn3Q9CVD2 355 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ccdc91Q9D8L5 442 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Pcf11G3X9Z4 1553 aa11.66□□□□□ -0.54
Scn9a-202ENSMUST00000100064 Ube3aO08759 870 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 237 ms