RNA–Protein interactions for RNA: ENSMUST00000096386.12

Rnf41-201, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-201ENSMUST00000096386 Trim28Q62318 834 aa12.38□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Prpf6Q91YR7 941 aaKnown RBP12.38□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ehd4Q9EQP2 541 aa12.38□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Cabp2Q9JLK4 216 aa12.38□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Tmem131lQ3U3D7 1597 aa12.38□□□□□ -0.43
Rnf41-201ENSMUST00000096386 1700019A02RikA0A087WPV9 146 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ppfia1B2RXQ2 1266 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ccdc191J3QQ27 883 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Traf1P39428 409 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Slc30a9Q5IRJ6 567 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Fmnl3Q6ZPF4 1028 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 4930519G04RikQ9CPT7 205 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Hip1rQ9JKY5 1068 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Stat2Q9WVL2 923 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Diaph1O08808 1255 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Slc1a4O35874 532 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Itga6Q61739 1091 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Msantd4Q91YU3 345 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Nop2Q922K7 793 aaKnown RBP12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Pibf1E9Q6K3 756 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Wee1P47810 646 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 ItgadQ3V0T4 1168 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Atp1a3Q6PIC6 1013 aa12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Sdad1Q80UZ2 687 aaKnown RBP12.37□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Tubb4bP68372 445 aaKnown RBP12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Cdr2P97817 455 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 C1qtnf12Q8R2Z0 308 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Gle1Q8R322 699 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Uchl5Q9WUP7 329 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 NeblQ0II04 452 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Spats2Q8K1N4 545 aaKnown RBP12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Tceanc2Q8R2M0 207 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ankrd1Q9CR42 319 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ipo7Q9EPL8 1038 aaKnown RBP12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Lmbr1Q9JIT0 490 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 ErmapQ9JLN5 566 aa12.36□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Lrrc7Q80TE7 1490 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Phactr4Q501J7 694 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Vipas39Q8BGQ1 491 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Cdc23Q8BGZ4 597 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Smc4Q8CG47 1286 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Mrpl12Q9DB15 201 aaKnown RBP12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Iqgap3F8VQ29 1632 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Tdo2P48776 406 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Zranb1Q7M760 708 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ppfibp1Q8C8U0 969 aaKnown RBP12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Paip2Q9D6V8 124 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Actn2Q9JI91 894 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Psma5Q9Z2U1 241 aaKnown RBP12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 IghaA0A0A6YXW6 389 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ap1g2O88512 791 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Iws1Q8C1D8 766 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Sox30Q8CGW4 782 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Eif2b5Q8CHW4 717 aa12.35□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Myo3bQ1EG27 1305 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Bin1O08539 588 aaKnown RBP12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Folh1O35409 752 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Tubb5P99024 444 aaKnown RBP12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ctdnep1Q3TP92 244 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Zswim4Q8C7B8 1101 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Brf1Q8CFK2 676 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 LgsnQ8CIX8 563 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 HnrnpmQ9D0E1 729 aaKnown RBP12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Eif3aP23116 1344 aaKnown RBP12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 IntuQ059U7 942 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Znf526Q8BI66 675 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Acsbg1Q99PU5 721 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Bcl11bQ99PV8 884 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Arfgef2A2A5R2 1792 aa12.34□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Ift172Q6VH22 1749 aa12.33□□□□□ -0.43
Rnf41-201ENSMUST00000096386 Rbm8a2A0A0N4SUH6 174 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Nbr1P97432 988 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Cd37Q61470 281 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Hps6Q8BLY7 805 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 PreplQ8C167 725 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Rbm8aQ9CWZ3 174 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Q9D1Z2 194 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Col4a3bpQ9EQG9 624 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tcof1O08784 1320 aaKnown RBP12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Grin2dQ03391 1323 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Tecpr2Q3UH45 1423 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Gm15262A0A140LIQ5 728 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 TrdnE9Q9K5 693 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 LbrQ3U9G9 626 aaKnown RBP12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Rap1gap2Q5SVL6 712 aaKnown RBP12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 TrhQ62361 256 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Sp8Q8BMJ8 486 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Desi2Q9D291 194 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Dnajc21E9Q8D0 531 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Nlrp4fQ66X05 959 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ccdc93Q7TQK5 629 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Sv2bQ8BG39 683 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Iffo2Q8R2V2 512 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ppp4r3bQ922R5 820 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 PigoQ9JJI6 1093 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Ak2Q9WTP6 239 aa12.33□□□□□ -0.44
Rnf41-201ENSMUST00000096386 LtkP08923 888 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Mcm10Q0VBD2 885 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 PsdQ5DTT2 1024 aa12.32□□□□□ -0.44
Rnf41-201ENSMUST00000096386 Fchsd1Q6PFY1 688 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms