RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 HellsQ60848 821 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Tcp11l1Q8BTG3 509 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gucy1a3Q9ERL9 691 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Erbb3Q61526 1339 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccdc170D3YXL0 722 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Adcy3Q8VHH7 1145 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 NapgQ9CWZ7 312 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Calm1P0DP26 149 aaKnown RBP10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Calm2P0DP27 149 aaKnown RBP10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Calm3P0DP28 149 aaKnown RBP10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Tubb5P99024 444 aaKnown RBP10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Specc1lQ2KN98 1118 aaKnown RBP10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Pram1Q6BCL1 675 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Kdm1aQ6ZQ88 853 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Clec11aO88200 328 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ttll12Q3UDE2 639 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Mkrn1Q9QXP6 481 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Prex2Q3LAC4 1598 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 PpardP35396 440 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gbp8Q2V6D6 525 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Kank4Q6P9J5 1016 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Diaph1O08808 1255 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ncf1Q09014 390 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ubac1Q8VDI7 409 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ebag9Q9D0V7 213 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Polr2dQ9D7M8 142 aaKnown RBP10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Zkscan5Q9Z1D8 819 aa10.56□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Vps41Q5KU39 853 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Tekt3Q6X6Z7 490 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 SdsQ8VBT2 327 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Krt7Q9DCV7 457 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gm44503E9PYU5 387 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 FanccP50652 591 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Eef1dP57776 281 aaKnown RBP10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Bach1P97302 739 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccnl1Q52KE7 532 aaKnown RBP10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Nsrp1Q5NCR9 542 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Terf1P70371 421 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gm28047Q3US59 414 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gigyf2Q6Y7W8 1291 aaKnown RBP10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Armc9Q9D2I5 817 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccdc89Q9DA73 370 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Adgrb2Q8CGM1 1561 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ufl1Q8CCJ3 793 aaKnown RBP10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Kcnh3Q9WVJ0 1095 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Prdm1Q60636 856 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gimap8Q75N62 688 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Wdr3Q8BHB4 942 aaKnown RBP10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gbp7Q91Z40 638 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 SncbQ91ZZ3 133 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Zmym3Q9JLM4 1370 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Chmp6P0C0A3 200 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Arfgap2Q99K28 520 aa10.55□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Casp1P29452 402 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gnat2P50149 354 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Sh3bp1P55194 680 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Lrsam1Q80ZI6 727 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Zfp202Q8C879 641 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gm5934D3Z4U6 212 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 LratQ9JI60 231 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ppp1r3fQ9JIG4 799 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gm156Q58A37 223 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Kifc2O08672 792 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Nlrp2Q4PLS0 1046 aaKnown RBP10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ankrd24Q80VM7 985 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Prune1Q8BIW1 454 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 HhatQ8BMT9 499 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ncaph2Q8BSP2 607 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccdc38Q8CDN8 563 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Atg4a-psA0A0G2JFS9 396 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Dnajc25A2ALW5 357 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Gm29094F6Q785 221 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Rrp1P56183 494 aaKnown RBP10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Rapgef1Q3UHC1 1224 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Igsf3Q6ZQA6 1194 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 GlmnQ8BZM1 596 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Atg4aQ8C9S8 396 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Cd274Q9EP73 290 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Osbpl5Q9ER64 874 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ddx23D3Z0M9 819 aaKnown RBP10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Timm10P62073 90 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Dcaf17Q3TUL7 519 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 SympkQ80X82 1284 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Sept6Q9R1T4 434 aa10.54□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Palm3A2TJV2 734 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Cbfa2t2O70374 594 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Hook2Q7TMK6 716 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Nop2Q922K7 793 aaKnown RBP10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Col4a3bpQ9EQG9 624 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Plagl1Q9JLQ4 704 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Tldc2A2ACG1 198 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ankrd35E9Q9D8 996 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Kif5cP28738 956 aaKnown RBP10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 IntuQ059U7 942 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Agbl1Q09M05 972 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Drc1Q3USS3 753 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Ccdc114Q3UX62 658 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 PpanQ91YU8 470 aaKnown RBP10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Exoc3l2D3YUP5 789 aa10.53□□□□□ -0.72
Prpf40a-201ENSMUST00000076313 Aox1O54754 1333 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms