RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Cdc45Q9Z1X9 566 aa17.08■□□□□ 0.33
Ushbp1-201ENSMUST00000049184 Dnajc25A2ALW5 357 aa17.08■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Specc1lQ2KN98 1118 aaKnown RBP17.08■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 PsdQ5DTT2 1024 aa17.08■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Lmbrd2Q8C561 694 aa17.08■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Nek3Q9R0A5 511 aa17.08■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Cyp2d34L7N463 504 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ccdc129Q14B48 1034 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Mctp2Q5RJH2 878 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Alg3Q8K2A8 438 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Dact1Q8R4A3 778 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 InsrrQ9WTL4 1300 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 A0A1L1SQF0 893 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Myo1aO88329 1043 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 AppP12023 770 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Cyp2d10P24456 504 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Igfbp6P47880 238 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Hspd1P63038 573 aaKnown RBP17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Golim4Q8BXA1 655 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Nek9Q8K1R7 984 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 TatQ8QZR1 454 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 MicalclQ9D5U9 680 aa17.07■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Rsrc2A2RTL5 376 aaKnown RBP17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ccng2O08918 344 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 NefhP19246 1090 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ttll12Q3UDE2 639 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Iqca1Q9CUL5 857 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Acot9Q9R0X4 439 aaKnown RBP17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Usp42B2RQC2 1324 aaKnown RBP17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Myo3bQ1EG27 1305 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Nid2O88322 1403 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Gas2l3Q3UWW6 683 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 FntaQ61239 377 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ccdc155Q80VJ8 648 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Cd209bQ8CJ91 325 aa17.06■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 GscQ02591 256 aa17.05■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Tmco3Q8BH01 678 aa17.05■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 LratQ9JI60 231 aa17.05■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ercc3P49135 783 aa17.05■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ctnna3Q65CL1 895 aa17.05■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Iqcb1Q8BP00 598 aa17.05■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Cwc15Q9JHS9 229 aaKnown RBP17.05■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Gm29094F6Q785 221 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Pdia6Q922R8 440 aaKnown RBP17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 MbipQ99LQ1 341 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 MthfsQ9D110 203 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Atp12aQ9Z1W8 1035 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Sall1Q9ER74 1322 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ric1Q69ZJ7 1422 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Arap3Q8R5G7 1538 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 D430041D05RikF6ZGR6 1678 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Gm3409A0A0G2JE67 319 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ccdc191J3QQ27 883 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Plcb3P51432 1234 aaKnown RBP17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Dpf2Q61103 391 aaKnown RBP17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Spty2d1Q68FG3 682 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ppp1r37Q8BKR5 712 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Tmem67Q8BR76 992 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Klhl30Q8C3F7 581 aa17.04■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Wdr19Q3UGF1 1341 aa17.03■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Vmn2r23E9PXI5 849 aa17.03■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ddx58Q6Q899 926 aa17.03■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ankib1Q6ZPS6 1085 aa17.03■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Myo1cQ9WTI7 1063 aa17.03■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Col22a1E9Q7P1 1613 aa17.03■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Ttll7A4Q9F0 912 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Hspa2P17156 633 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Q66JV7 365 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Drc7Q6V3W6 876 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Sec62Q8BU14 398 aaKnown RBP17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 AidaQ8C4Q6 305 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Evc2Q8K1G2 1220 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Vnn1Q9Z0K8 512 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Mdh1P14152 334 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Washc4Q3UMB9 1173 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 TxlnaQ6PAM1 554 aaKnown RBP17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Bicdl2Q8CHW5 507 aa17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Zcchc17Q9ESX4 241 aaKnown RBP17.02■□□□□ 0.32
Ushbp1-201ENSMUST00000049184 Shank2Q80Z38 1476 aa17.02■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Sycp2lA0A0M3U1B0 842 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Nlrp1aQ2LKU9 1182 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Ripor2Q80U16 1078 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Rbm17Q8JZX4 405 aaKnown RBP17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Nat10Q8K224 1024 aaKnown RBP17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Prc1Q99K43 603 aaKnown RBP17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Chmp3Q9CQ10 224 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Als2Q920R0 1651 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Myo1bP46735 1107 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Tbx2Q60707 711 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Ppp4r3aQ6P2K6 820 aa17.01■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Klra1P20937 262 aa17■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Tmem59lQ7TNI2 337 aa17■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Cep120Q7TSG1 988 aa17■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Gdap1l1Q8VE33 370 aa17■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Ddx60E9PZQ1 1711 aa17■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Pcdhb14Q6PB90 796 aa17■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Ccdc12Q8R344 166 aaKnown RBP17■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Sos2Q02384 1333 aa16.99■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Exoc3l2D3YUP5 789 aa16.99■□□□□ 0.31
Ushbp1-201ENSMUST00000049184 Pald1P70261 859 aa16.99■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms