RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Tbc1d8Q9Z1A9 1134 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Lnx1O70263 728 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Sept1P42209 366 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Snrpa1P57784 255 aaKnown RBP10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Nme8Q715T0 586 aa10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Ddx54Q8K4L0 874 aaKnown RBP10.84□□□□□ -0.67
Usp28-201ENSMUST00000047349 Cplx1P63040 134 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Gm28047Q3US59 414 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Hnrnpul1Q8VDM6 859 aaKnown RBP10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Adam1aQ60813 791 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Col4a1P02463 1669 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Tcof1O08784 1320 aaKnown RBP10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Aox4Q3TYQ9 1336 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Lrp6O88572 1613 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Dhx8A2A4P0 1244 aaKnown RBP10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Brpf3B2KF05 1204 aaKnown RBP10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Tpd52l1O54818 204 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ifit1Q64282 463 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Lrrc59Q922Q8 307 aaKnown RBP10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Rcan1Q9JHG6 198 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Nfe2l3Q9WTM4 660 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Foxo4Q9WVH3 505 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ccne2Q9Z238 404 aa10.83□□□□□ -0.68
Usp28-201ENSMUST00000047349 Pcdhb9E9Q5G2 828 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Metap2O08663 478 aaKnown RBP10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 CrcpO35427 148 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Cnnm2Q3TWN3 875 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Slc38a10Q5I012 1090 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 VmacQ8BP01 174 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Sall1Q9ER74 1322 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Shank3Q4ACU6 1730 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ano10Q8BH79 659 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Wasf1Q8R5H6 559 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Gm20425E9Q035 978 aaKnown RBP10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Anxa1P10107 346 aaKnown RBP10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 SrprbP47758 269 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Zbtb1Q91VL9 713 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Med23Q80YQ2 1367 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Gm4340L7N2C4 268 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Gnat2P50149 354 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Sptlc2P97363 560 aaKnown RBP10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Washc4Q3UMB9 1173 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 SdsQ8VBT2 327 aa10.82□□□□□ -0.68
Usp28-201ENSMUST00000047349 Prl7d1P04769 244 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Trim30aP15533 496 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 NapbP28663 298 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Agtpbp1Q641K1 1218 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Esco1Q69Z69 843 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Slf2Q6P9P0 1278 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Gimap5Q8BWF2 308 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Rec8Q8C5S7 591 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Rbm10Q99KG3 930 aaKnown RBP10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ankrd1Q9CR42 319 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Bin2D3Z6Q9 489 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Hmx1O70218 332 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 IqcgQ80W32 419 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Marf1Q8BJ34 1730 aaKnown RBP10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Dnajc5P60904 198 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Slu7Q8BHJ9 585 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Nop2Q922K7 793 aaKnown RBP10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Syt10Q9R0N4 523 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ssc5dQ8BV57 1371 aa10.81□□□□□ -0.68
Usp28-201ENSMUST00000047349 Cyp3a59D3Z2W7 503 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ncbp1Q3UYV9 790 aaKnown RBP10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Rps6ka5Q8C050 863 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Prr5lA2AVJ5 370 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Vmn2r23E9PXI5 849 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ercc3P49135 783 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 IncenpQ9WU62 880 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Tnrc6cQ3UHC0 1690 aaKnown RBP10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Brwd3A2AHJ4 1799 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Cyp2d34L7N463 504 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Sptlc3Q8BG54 563 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Emilin1Q99K41 1017 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Grpel1Q99LP6 217 aa10.8□□□□□ -0.68
Usp28-201ENSMUST00000047349 Casp12O08736 419 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ccng2O08918 344 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ptgs1P22437 602 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Rnf41Q8BH75 317 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Smim5Q8BT42 78 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ints4Q8CIM8 964 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Paf1Q8K2T8 535 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ripk4Q9ERK0 786 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Irx4Q9QY61 515 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Slc7a3P70423 618 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Slc44a1Q6X893 653 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Tmem59lQ7TNI2 337 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ankrd23Q812A3 306 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Pm20d1Q8C165 503 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Snw1Q9CSN1 536 aaKnown RBP10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 Tbc1d7Q9D0K0 293 aa10.79□□□□□ -0.68
Usp28-201ENSMUST00000047349 CebpzP53569 1052 aaKnown RBP10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Ifit1bl2Q3U687 466 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Pla2g4fQ50L41 855 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Edrf1Q6GQV7 1239 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Stxbp4Q9WV89 557 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Mapk8ip1Q9WVI9 707 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Myh7Q91Z83 1935 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Gm43638A0A0J9YU36 694 aa10.78□□□□□ -0.68
Usp28-201ENSMUST00000047349 Foxp1P58462 705 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms