RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Kiaa1524Q8BWY9 907 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Thoc1Q8R3N6 657 aaKnown RBP9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rufy2Q8R4C2 606 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 BrapQ99MP8 591 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Golga5Q9QYE6 729 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Pde3aQ9Z0X4 1141 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cfap99A0A140LIX9 648 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Klra5Q60652 266 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Znf532Q6NXK2 1036 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Naa16Q9DBB4 864 aa9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tcof1O08784 1320 aaKnown RBP9.52□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Klra1P20937 262 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Gm21985Q6P6P5 1106 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Usp44Q8C2S0 711 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Trim11Q99PQ2 467 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ankrd1Q9CR42 319 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rims2Q9EQZ7 1530 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 BcorQ8CGN4 1759 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Uri1Q3TLD5 531 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cdc37Q61081 379 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Abcf1Q6P542 837 aaKnown RBP9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ccdc82Q6PG04 518 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Fsd1Q7TPM6 496 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Etf1Q8BWY3 437 aaKnown RBP9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Pms1Q8K119 917 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Stk38Q91VJ4 465 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Trim59Q922Y2 403 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Erc1Q99MI1 1120 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Mst1rQ62190 1378 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 LyarQ08288 388 aaKnown RBP9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Acbd5Q5XG73 508 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 SympkQ80X82 1284 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Vps18Q8R307 973 aa9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Telo2Q9DC40 840 aaKnown RBP9.51□□□□□ -0.89
Cdc40-201ENSMUST00000044166 DbnlQ62418 436 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Nxf7Q80SZ6 620 aaKnown RBP9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Fam76aQ922G2 307 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Nop2Q922K7 793 aaKnown RBP9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 EcsitQ9QZH6 435 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Mon2Q80TL7 1715 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Kdm6aO70546 1401 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Prl7a2O54831 253 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Mei1Q9D4I2 1268 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 ChmQ9QXG2 665 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Stxbp4Q9WV89 557 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 C5P06684 1680 aa9.5□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ppfia3P60469 1194 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tmem87bQ8BKU8 555 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Mei4Q8BRM6 389 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ptcd1Q8C2E4 695 aaKnown RBP9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Acsbg1Q99PU5 721 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cwc15Q9JHS9 229 aaKnown RBP9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Taf7Q9R1C0 341 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Ppp2r3dQ9Z176 491 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tulp1Q9Z273 543 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Gm10563F6WIE4 79 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Bin1O08539 588 aaKnown RBP9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Kif3cO35066 796 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rgs9O54828 675 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 GmnnO88513 206 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Irx1P81068 480 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Itga6Q61739 1091 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 TatQ8QZR1 454 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 TxlnbQ8VBT1 685 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Gm11983V9GXS8 105 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Wdr17E9Q271 1322 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 CoblQ5NBX1 1337 aaKnown RBP9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cyb5rlB1AS42 316 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Klhl33G3UW92 533 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Mcm6P97311 821 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Klra4Q60651 263 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Q8C5K5 320 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cypt1Q8CH20 168 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tbc1d7Q9D0K0 293 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Lonp2Q9DBN5 852 aa9.49□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rb1P13405 921 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rfc1P35601 1131 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Map9Q3TRR0 646 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Vps54Q5SPW0 977 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 1700122O11RikJ3QPW6 241 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Exosc10P56960 887 aaKnown RBP9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 NeblQ0II04 452 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Maats1Q8BRC6 783 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Mb21d2Q8C525 428 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Mis12Q9CY25 206 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Zranb2Q9R020 330 aaKnown RBP9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Gm42641I6L9G2 585 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Cpsf2O35218 782 aaKnown RBP9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Sptlc2P97363 560 aaKnown RBP9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Znf697Q569E7 569 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 GpkowQ56A08 488 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Jarid2Q62315 1234 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Nlrp9bQ66X22 1003 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Atl2Q6PA06 583 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 AtripQ8BMG1 785 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Tmc2Q8R4P4 888 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Yeats4Q9CR11 227 aaKnown RBP9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Rrs1Q9CYH6 365 aaKnown RBP9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Scnn1bQ9WU38 638 aa9.48□□□□□ -0.89
Cdc40-201ENSMUST00000044166 Actn3O88990 900 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms