RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sun3Q5SS91 320 aa11.73□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Paf1Q8K2T8 535 aa11.73□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Col4a3bpQ9EQG9 624 aa11.73□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Cyp2ab1S4R196 498 aa11.73□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Trim30cD3YVI9 513 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Anp32cQ64G17 123 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Lmbrd2Q8C561 694 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Fam76aQ922G2 307 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Iqgap1Q9JKF1 1657 aaKnown RBP11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Sh3tc1G3X9F6 1346 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Adgrb3Q80ZF8 1522 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Nfxl1E9Q8I7 918 aaKnown RBP11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Vwa3bJ9JI28 736 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Zbtb40Q6PCS8 1258 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Hexim1Q8R409 356 aaKnown RBP11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 AceP09470 1312 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Fbf1A2A870 1173 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 PtpruB1AUH1 1446 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Gna11P21278 359 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Adora1Q60612 326 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Fez2Q6TYB5 348 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Nap1l4Q78ZA7 375 aaKnown RBP11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Acnat2Q8BGG9 420 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 LratQ9JI60 231 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Uso1Q9Z1Z0 959 aaKnown RBP11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Nlrp9aQ66X03 949 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Tsr2Q8C8T8 191 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Cfap53Q9D439 514 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Osbpl5Q9ER64 874 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Txnrd1Q9JMH6 613 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Foxo3Q9WVH4 672 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Col1a2Q01149 1372 aa11.72□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Prl3d1P18121 224 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Pm20d1Q8C165 503 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Dydc1Q9D9T0 175 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 DmtnQ9WV69 405 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Syde2E9PUP1 1314 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Tbc1d4Q8BYJ6 1307 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Dync1i1O88485 628 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Fbln2P37889 1221 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Tubb5P99024 444 aaKnown RBP11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 IntuQ059U7 942 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Tekt3Q6X6Z7 490 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 PcQ05920 1178 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 EspnlQ3UYR4 1005 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Larp6Q8BN59 492 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Exoc1Q8R3S6 894 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Efhd1Q9D4J1 240 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Tacc2Q9JJG0 1149 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 AmfrQ9R049 643 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 IncenpQ9WU62 880 aa11.71□□□□□ -0.53
Ccdc40-201ENSMUST00000035935 Npc1l1Q6T3U4 1333 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Mindy4Q3UQI9 744 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Abtb2Q7TQI7 1024 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Rab3gap1Q80UJ7 981 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 9230110C19RikQ8CC70 267 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Vps36Q91XD6 386 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Grpel1Q99LP6 217 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Znf521Q6KAS7 1311 aa11.71□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Gm10378F6XQQ1 160 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Prl7a2O54831 253 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Cetn1P41209 172 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Jarid2Q62315 1234 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 RtcbQ99LF4 505 aaKnown RBP11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Yeats4Q9CR11 227 aaKnown RBP11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Cdk12Q14AX6 1484 aaKnown RBP11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Serpina10Q8R121 448 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Egfl6Q9JJZ5 550 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Ncf1Q09014 390 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Plbd2Q3TCN2 594 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Zbtb45Q52KG4 520 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Pram1Q6BCL1 675 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Prune1Q8BIW1 454 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 SdsQ8VBT2 327 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Setdb1O88974 1307 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 NfkbibQ60778 359 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Fnbp4Q6ZQ03 1031 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Sh3d21Q7TSG5 549 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Rbm19Q8R3C6 952 aaKnown RBP11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Naa16Q9DBB4 864 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Clip2Q9Z0H8 1047 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Homer1Q9Z2Y3 366 aa11.7□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Gemin5Q8BX17 1502 aaKnown RBP11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Fam186bD3Z420 943 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Ms4a1P19437 291 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Iqsec3Q3TES0 1195 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Unc5clQ6R653 518 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Abca6Q8K441 1624 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 CemipQ8BI06 1361 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Glg1Q61543 1175 aaKnown RBP11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Gas8Q60779 478 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Asic1Q6NXK8 526 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Ano6Q6P9J9 911 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Tubb2aQ7TMM9 445 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Ttc27Q8CD92 847 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Arhgef6Q8K4I3 771 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Tubb2bQ9CWF2 445 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Kcnh3Q9WVJ0 1095 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Trim55G3X8Y1 545 aa11.69□□□□□ -0.54
Ccdc40-201ENSMUST00000035935 Casp1P29452 402 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 181.6 ms