RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Camsap1A2AHC3 1581 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Arap1Q4LDD4 1452 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Pih1h3bQ8C6P5 218 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Cabp5Q9JLK3 173 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Cd72P21855 354 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ccdc70Q9D9B0 223 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Becn2P0DM65 447 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Lrriq1Q0P5X1 1673 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Mcm7Q61881 719 aaKnown RBP16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 TrdnE9Q9K5 693 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Trim7Q923T7 510 aa16.16■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Flot1O08917 428 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Gimap8Q75N62 688 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Sugp2Q8CH09 1067 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Parp10Q8CIE4 960 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Amotl1Q9D4H4 968 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ccdc13D3YV10 709 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Chmp6P0C0A3 200 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Retreg2Q6NS82 541 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ranbp6Q8BIV3 1105 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Lmod1Q8BVA4 595 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Cnot6lQ8VEG6 555 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 OvosQ3UU35 1456 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Ccdc110Q3V125 848 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Syt10Q9R0N4 523 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 U2af1l4Q8BGJ9 220 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Pdcd6ipQ9WU78 869 aaKnown RBP16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Myo6Q64331 1265 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Trim60Q8VI40 466 aa16.15■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Cnnm4Q69ZF7 771 aa16.14■□□□□ 0.18
Col7a1-201ENSMUST00000026740 Nub1P54729 614 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Sptlc2P97363 560 aaKnown RBP16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Stat2Q9WVL2 923 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Ccdc28aQ8CEI3 192 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Pde3aQ9Z0X4 1141 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Tbc1d2B1AVH7 922 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Q3UJC8 639 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 VeztQ3ZK22 780 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Rtn1Q8K0T0 780 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Sun3Q5SS91 320 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Apbb1ipQ8R5A3 670 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Rdm1Q9CQK3 281 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Slc27a3O88561 667 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Zbtb22Q9Z0G7 638 aa16.14■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Rtel1Q0VGM9 1203 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Lrriq3Q14DL3 633 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Mcm5P49718 733 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Map3k2Q61083 619 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 KdrP35918 1367 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Sox13Q04891 613 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Luc7l3Q5SUF2 432 aaKnown RBP16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Ltv1Q6NSQ7 470 aaKnown RBP16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 BrapQ99MP8 591 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 CacybpQ9CXW3 229 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Krt18P05784 423 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Tyro3P55144 880 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Ctdp1Q7TSG2 960 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Klhdc4Q921I2 584 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Polr3aB2RXC6 1390 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 RilpQ5ND29 369 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Ppfia3P60469 1194 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Psmd6Q99JI4 389 aa16.13■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Arhgap4B1AUY3 965 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Ccdc189Q6NZQ0 333 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Zfp397Q7TNK4 527 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Rab44Q8CB87 725 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 AI481877A2ALV5 1481 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Mrc2Q64449 1479 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Prr16A3KMN5 304 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Dmrt2Q8BG36 561 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Synpo2Q91YE8 1087 aaKnown RBP16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Cyp2ab1S4R196 498 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Igf1rQ60751 1373 aa16.12■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Usp35M0QWN7 1009 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Ccdc162pQ0VG85 912 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Naip7Q9JIB3 1402 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Naip6Q9JIB6 1403 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Ccdc175E9PVB3 822 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Tpd52l2Q9CYZ2 220 aaKnown RBP16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Taf4E9QAP7 1042 aaKnown RBP16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Klhl20Q8VCK5 604 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 VimP20152 466 aaKnown RBP16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Gm5934D3Z4U6 212 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Slc5a4bQ91ZP4 660 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 GabpaQ00422 454 aa16.11■□□□□ 0.17
Col7a1-201ENSMUST00000026740 ZfaP23607 742 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Nsfl1cQ9CZ44 370 aaKnown RBP16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Cdca7Q9D0M2 382 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Pet2A2AHY8 747 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Gm10110D3Z5M2 615 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Gm5935Q497S0 212 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Pfdn6Q03958 127 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Skap1Q3UUV5 355 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 SarnpQ9D1J3 210 aaKnown RBP16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Rbbp8nlA2ABX0 614 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 NapgQ9CWZ7 312 aa16.1■□□□□ 0.17
Col7a1-201ENSMUST00000026740 YwhaeP62259 255 aaKnown RBP16.09■□□□□ 0.17
Col7a1-201ENSMUST00000026740 SnrkQ8VDU5 748 aa16.09■□□□□ 0.17
Col7a1-201ENSMUST00000026740 Eef2P58252 858 aaKnown RBP16.09■□□□□ 0.17
Col7a1-201ENSMUST00000026740 HdxQ14B70 692 aa16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms