RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Grpel1Q99LP6 217 aa24.03■■□□□ 1.44
Trim47-201ENSMUST00000021120 Slx4ipQ9D7Y9 413 aa24.03■■□□□ 1.44
Trim47-201ENSMUST00000021120 Zfp51Q3U4L8 781 aa24.02■■□□□ 1.44
Trim47-201ENSMUST00000021120 UvssaQ9D479 717 aa24.02■■□□□ 1.44
Trim47-201ENSMUST00000021120 Ltv1Q6NSQ7 470 aaKnown RBP24.02■■□□□ 1.44
Trim47-201ENSMUST00000021120 Mx2Q9WVP9 655 aa24.02■■□□□ 1.44
Trim47-201ENSMUST00000021120 Rad50P70388 1312 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Prl3d1P18121 224 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 NfixP70257 488 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Gja5Q01231 358 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Casc1Q6TDU8 730 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Q8C6G1 249 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Slc14a2Q8R4T9 930 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Nup188Q6ZQH8 1759 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Myh15E9Q264 1925 aa24.01■■□□□ 1.43
Trim47-201ENSMUST00000021120 Cyp3a57D3YYZ0 503 aa24■■□□□ 1.43
Trim47-201ENSMUST00000021120 EzrP26040 586 aaKnown RBP24■■□□□ 1.43
Trim47-201ENSMUST00000021120 Med4Q9CQA5 270 aa24■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ppfia1B2RXQ2 1266 aa24■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ube2hP62257 183 aa24■■□□□ 1.43
Trim47-201ENSMUST00000021120 Tshz2Q68FE9 1030 aa24■■□□□ 1.43
Trim47-201ENSMUST00000021120 Klhl34A2AI76 644 aa23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 Adcy5P84309 1262 aa23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 Abtb2Q7TQI7 1024 aa23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 Npc1l1Q6T3U4 1333 aa23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 VirmaA2AIV2 1811 aaKnown RBP23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ddx11Q6AXC6 880 aa23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ccdc94Q9D6J3 314 aa23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 Slfn1Q9Z0I7 337 aa23.99■■□□□ 1.43
Trim47-201ENSMUST00000021120 Zswim8Q3UHH1 1832 aaKnown RBP23.98■■□□□ 1.43
Trim47-201ENSMUST00000021120 Zscan22Q8BGS5 496 aa23.98■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ube3bQ9ES34 1070 aa23.98■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ptgs1P22437 602 aa23.97■■□□□ 1.43
Trim47-201ENSMUST00000021120 Fhdc1Q3ULZ2 1149 aa23.97■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ppp4r3bQ922R5 820 aa23.97■■□□□ 1.43
Trim47-201ENSMUST00000021120 Sh3bp5lQ99LH9 392 aa23.97■■□□□ 1.43
Trim47-201ENSMUST00000021120 Zfp804bA0A0G2JGH6 1343 aa23.97■■□□□ 1.43
Trim47-201ENSMUST00000021120 Dok7Q18PE0 504 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Mtcl1Q3UHU5 1945 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Myh4Q5SX39 1939 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Myh3P13541 1940 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Mdm2P23804 489 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Rhbdl3P58873 404 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 NpeppsQ11011 920 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Glg1Q61543 1175 aaKnown RBP23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Tango6Q8C3S2 1079 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Stx6Q9JKK1 255 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Irs4Q9Z0Y7 1216 aa23.96■■□□□ 1.43
Trim47-201ENSMUST00000021120 Ell2Q3UKU1 639 aa23.95■■□□□ 1.42
Trim47-201ENSMUST00000021120 Bms1Q6PGF5 1284 aaKnown RBP23.95■■□□□ 1.42
Trim47-201ENSMUST00000021120 Ccdc178Q8CDV0 866 aa23.95■■□□□ 1.42
Trim47-201ENSMUST00000021120 Myh7Q91Z83 1935 aa23.95■■□□□ 1.42
Trim47-201ENSMUST00000021120 Top1mtQ8R4U6 593 aa23.95■■□□□ 1.42
Trim47-201ENSMUST00000021120 Rufy3Q9D394 469 aa23.95■■□□□ 1.42
Trim47-201ENSMUST00000021120 Bmp2kQ91Z96 1138 aa23.94■■□□□ 1.42
Trim47-201ENSMUST00000021120 Mlh1Q9JK91 760 aa23.94■■□□□ 1.42
Trim47-201ENSMUST00000021120 Add2Q9QYB8 725 aa23.94■■□□□ 1.42
Trim47-201ENSMUST00000021120 Izumo3A6PWV3 263 aa23.94■■□□□ 1.42
Trim47-201ENSMUST00000021120 Gjb2Q00977 226 aa23.94■■□□□ 1.42
Trim47-201ENSMUST00000021120 Pram1Q6BCL1 675 aa23.94■■□□□ 1.42
Trim47-201ENSMUST00000021120 MecomP14404 1042 aa23.93■■□□□ 1.42
Trim47-201ENSMUST00000021120 Bend4P86174 541 aa23.93■■□□□ 1.42
Trim47-201ENSMUST00000021120 MsnP26041 577 aaKnown RBP23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Ccdc162pQ0VG85 912 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Nol12Q8BG17 217 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 DpydQ8CHR6 1025 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 HdlbpQ8VDJ3 1268 aaKnown RBP23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 PhaxQ9JJT9 385 aaKnown RBP23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Cyp2ab1S4R196 498 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Ltn1Q6A009 1767 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Cavin1O54724 392 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Nme8Q715T0 586 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Samm50Q8BGH2 469 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 IarsQ8BU30 1262 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 WaslQ91YD9 501 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Mtfr1lQ9CWE0 289 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Sytl4Q9R0Q1 673 aa23.92■■□□□ 1.42
Trim47-201ENSMUST00000021120 Tmem132aQ922P8 1018 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Erc1Q99MI1 1120 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Mroh6V9GX81 722 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Arfgef1G3X9K3 1846 aaKnown RBP23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 1700006A11RikB9EHI3 544 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Syt1P46096 421 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Sept9Q80UG5 583 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Map10Q8BJS7 891 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Naa30Q8CES0 364 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Irx4Q9QY61 515 aa23.91■■□□□ 1.42
Trim47-201ENSMUST00000021120 Frmpd3A0A140LIW3 1774 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Ankrd63A2ARS0 390 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Cfap70D3YVL2 1141 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Prl7d1P04769 244 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Slc7a3P70423 618 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Pcsk7Q61139 770 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Cfap73J3QPZ5 306 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Lmnb1P14733 588 aaKnown RBP23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Il17raQ60943 864 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Atp2b4Q6Q477 1205 aa23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Smc3Q9CW03 1217 aaKnown RBP23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 Mrpl12Q9DB15 201 aaKnown RBP23.9■■□□□ 1.42
Trim47-201ENSMUST00000021120 A0A1W2P7S8 802 aa23.89■■□□□ 1.41
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms