RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 NapgQ9CWZ7 312 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc105Q9D4K7 499 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc124Q9D8X2 217 aaKnown RBP10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ccdc89Q9DA73 370 aa10.29□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Bpifb4A2BGH0 617 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Gjc1P28229 396 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ppfia3P60469 1194 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Stim2P83093 746 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 EsrrbQ61539 433 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Actr5Q80US4 605 aaKnown RBP10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ncaph2Q8BSP2 607 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Lmod1Q8BVA4 595 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Mterf4Q8BVN4 346 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 DymQ8CHY3 669 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Ifih1Q8R5F7 1025 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Naip5Q9R016 1403 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Znf365Q8BG89 408 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 GptQ8QZR5 496 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Kdm4cQ8VCD7 1054 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Adcy3Q8VHH7 1145 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Aox1O54754 1333 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Gm5934D3Z4U6 212 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Zap70P43404 618 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cage1Q5IR70 849 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Acot9Q9R0X4 439 aaKnown RBP10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Astn2Q80Z10 1352 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Fam135bQ9DAI6 1403 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Gm2030D3Z7C4 212 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 PcQ05920 1178 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Nop56Q9D6Z1 580 aaKnown RBP10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Plcb1Q9Z1B3 1216 aa10.28□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 PrphP15331 475 aa10.27□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Trak2Q6P9N8 913 aa10.27□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Asic3Q6X1Y6 530 aa10.27□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Lzts2Q91YU6 671 aa10.27□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 SncbQ91ZZ3 133 aa10.27□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Chd1lQ9CXF7 900 aa10.27□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Rfwd2Q9R1A8 733 aaKnown RBP10.27□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Mybl2P48972 704 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Nlrp2Q4PLS0 1046 aaKnown RBP10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gas2l2Q5SSG4 860 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Kif1bpQ6ZPU9 617 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 NexmifQ5DTT1 1515 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Frmpd2A0A140LI67 1392 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Taf4bG5E8Z2 855 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 S100bP50114 92 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Rrp1P56183 494 aaKnown RBP10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 ArsiQ32KI9 573 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ccdc110Q3V125 848 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 ErmnQ5EBJ4 281 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Swap70Q6A028 585 aaKnown RBP10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ctdp1Q7TSG2 960 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pcdhb2Q91Y00 799 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Sept14Q9DA97 430 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Trpc3Q9QZC1 836 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Dnajc21E9Q8D0 531 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Cetn3O35648 167 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Cnnm4Q69ZF7 771 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ints8Q80V86 995 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Cyp4f39Q8BGU0 532 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 GckrQ91X44 587 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 PdiltQ9DAN1 588 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Rilpl1Q9JJC6 406 aa10.27□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Diaph2O70566 1098 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Psmc4P54775 418 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Psmd1Q3TXS7 953 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Exoc3Q6KAR6 755 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Retreg2Q6NS82 541 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Pak2Q8CIN4 524 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Nip7Q9CXK8 180 aaKnown RBP10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 A0A1W2P7S8 802 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Tbc1d2B1AVH7 922 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Cdc5lQ6A068 802 aaKnown RBP10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Galnt17Q7TT15 598 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Cep128Q8BI22 1102 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Sugp2Q8CH09 1067 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Mast3Q3U214 1321 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Gm45015A0A140LII9 184 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Trove2O08848 538 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ano9P86044 747 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Tekt3Q6X6Z7 490 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ddx27Q921N6 760 aaKnown RBP10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Nop2Q922K7 793 aaKnown RBP10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ndufab1Q9CR21 156 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ppp1r9aH3BJD6 1292 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Chmp6P0C0A3 200 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ublcp1Q8BGR9 318 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Clasp2Q8BRT1 1286 aaKnown RBP10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Vps52Q8C754 723 aaKnown RBP10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Serpina10Q8R121 448 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ginm1Q91WR6 327 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Atp6v0a4Q920R6 833 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 FanclQ9CR14 375 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Golga5Q9QYE6 729 aa10.26□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Kif11Q6P9P6 1052 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Tti2Q8BGV4 512 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Atg3Q9CPX6 314 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Zkscan5Q9Z1D8 819 aa10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 VimP20152 466 aaKnown RBP10.25□□□□□ -0.77
Ccdc47-201ENSMUST00000002043 Ankrd40Q5SUE8 363 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms