RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 MicalclQ9D5U9 680 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Dnai2A2AC93 623 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Samsn1P57725 372 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Appbp2Q9DAX9 585 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 WtapQ9ER69 396 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Parp14Q2EMV9 1817 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Diaph1O08808 1255 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Slc4a4O88343 1079 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Tango6Q8C3S2 1079 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 BbxQ8VBW5 907 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ppp4r3bQ922R5 820 aa10.88□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Msh6P54276 1358 aaKnown RBP10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Dhx8A2A4P0 1244 aaKnown RBP10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Myl3P09542 204 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 CalrP14211 416 aaKnown RBP10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Psmb7P70195 277 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Pex1Q5BL07 1284 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 E4f1Q8CCE9 783 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ccdc12Q8R344 166 aaKnown RBP10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 IncenpQ9WU62 880 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 CltcQ68FD5 1675 aaKnown RBP10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 AglF8VPN4 1532 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Gm28047Q3US59 414 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ripor2Q80U16 1078 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Mb21d2Q8C525 428 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Nop2Q922K7 793 aaKnown RBP10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ifi35Q9D8C4 286 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Cfap45Q9D9U9 551 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 4930407I10RikD3Z5T8 1512 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Abcc12Q80WJ6 1366 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Cops6O88545 324 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Pfkfb1P70266 471 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Sun3Q5SS91 320 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Nlrp9aQ66X03 949 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Kcnj14Q8JZN3 434 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Rbm5Q91YE7 815 aaKnown RBP10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Cep89Q9CZX2 791 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Lmbr1Q9JIT0 490 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Pde3aQ9Z0X4 1141 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Sel1lQ9Z2G6 790 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Abca14E9Q8F8 1683 aa10.87□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Cep112Q5PR68 954 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ttc12Q8BW49 704 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Kcnq3Q8K3F6 873 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Plekho1Q9JIY0 408 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ktn1Q61595 1327 aaKnown RBP10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Cyp26c1B2RXA7 518 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Trim55G3X8Y1 545 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ampd3O08739 766 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ftl2P49945 183 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Card10P58660 1021 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Arglu1Q3UL36 271 aaKnown RBP10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Hspa4Q61316 841 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Luc7l2Q7TNC4 392 aaKnown RBP10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Dnaaf2Q8BPI1 814 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Atad2Q8CDM1 1040 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Fam76aQ922G2 307 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Arhgef28P97433 1693 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Aox2Q5SGK3 1345 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Sycp2lA0A0M3U1B0 842 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Speer4dL7N216 212 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Igfbp6P47880 238 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Jmjd4Q8BFT6 427 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Pnpla2Q8BJ56 486 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Zswim4Q8C7B8 1101 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Znf131Q8K3J5 619 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Stx8O88983 236 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ifit1bl2Q3U687 466 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Tab2Q99K90 693 aa10.86□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Cyp26a1O55127 497 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Kmt5bQ3U8K7 883 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Tmem143Q8VD26 458 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Krt23Q99PS0 422 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Polr2dQ9D7M8 142 aaKnown RBP10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Kcnh3Q9WVJ0 1095 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Mst1rQ62190 1378 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Dip2bQ3UH60 1574 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Nkx2-3P97334 362 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 RgmbQ7TQ33 436 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Necab1Q8BG18 352 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ppm1fQ8CGA0 452 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Rtn1Q8K0T0 780 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 ZgpatQ8VDM1 511 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Kri1Q8VDQ9 704 aaKnown RBP10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Usp42B2RQC2 1324 aaKnown RBP10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Pde4bB1AWC9 736 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Gm12185Q5NCB2 835 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ehd2Q8BH64 543 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 4930548H24RikQ9D496 437 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Klhl10Q9D5V2 608 aa10.85□□□□□ -0.67
Col6a1-201ENSMUST00000001147 MypnQ5DTJ9 1315 aa10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Kdm3aQ6PCM1 1323 aa10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Fnbp4Q6ZQ03 1031 aa10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Tbc1d8bA3KGB4 1114 aa10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Casp1P29452 402 aa10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Abtb2Q7TQI7 1024 aa10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Sec62Q8BU14 398 aaKnown RBP10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ccz1Q8C1Y8 480 aa10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Ufl1Q8CCJ3 793 aaKnown RBP10.84□□□□□ -0.67
Col6a1-201ENSMUST00000001147 Phldb2Q8K1N2 1249 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms