RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PATZ1Q9HBE1 687 aaKnown RBP6.09□□□□□ -1.43
PHGDH-225ENST00000641720 TCF7L1Q9HCS4 588 aa6.09□□□□□ -1.43
PHGDH-225ENST00000641720 HMG20AQ9NP66 347 aa6.09□□□□□ -1.43
PHGDH-225ENST00000641720 MRPS28Q9Y2Q9 187 aaKnown RBP6.09□□□□□ -1.43
PHGDH-225ENST00000641720 AK6Q9Y3D8 172 aaKnown RBP6.09□□□□□ -1.43
PHGDH-225ENST00000641720 FRAS1Q86XX4 4008 aa6.09□□□□□ -1.44
PHGDH-225ENST00000641720 A0A0B4J203 849 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 TRAV1-2A0A0B4J238 106 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 A0A1B0GUS0 222 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 CLPSL1A2RUU4 121 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 NKX6-3A6NJ46 265 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 RFPL4AA6NLU0 287 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 C22orf46C9J442 243 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 RFPL4AL1F8VTS6 287 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 DVL1O14640 695 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 SLC22A1O15245 554 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 AIREO43918 545 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 CYB5AP00167 134 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 KNG1P01042 644 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 PRB2P02812 416 aaPredicted RBP6.08□□□□□ -1.44
PHGDH-225ENST00000641720 WNT2P09544 360 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 CD37P11049 281 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 MYL9P24844 172 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 PITPNBP48739 271 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 RAG2P55895 527 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 CAV3P56539 151 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 CLDN12P56749 244 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 LSM3P62310 102 aaKnown RBP6.08□□□□□ -1.44
PHGDH-225ENST00000641720 GUCA2AQ02747 115 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 IKZF1Q13422 519 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 P2RY14Q15391 338 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 SLC22A6Q4U2R8 563 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 AWAT2Q6E213 333 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 GLIPR1L1Q6UWM5 242 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 ZNF788Q6ZQV5 615 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 CDH26Q8IXH8 852 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 Q8IYB0 196 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 FAM58AQ8N1B3 248 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 TMEM104Q8NE00 496 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 OR8B3Q8NGG8 313 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 TBC1D15Q8TC07 691 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 NEIL1Q96FI4 390 aaPredicted RBP6.08□□□□□ -1.44
PHGDH-225ENST00000641720 OR8B2Q96RD0 313 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 UQCC2Q9BRT2 126 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 FUNDC2Q9BWH2 189 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 CHIAQ9BZP6 476 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 RASL12Q9NYN1 266 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 IL36GQ9NZH8 169 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 OR14J1Q9UGF5 321 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 SSR3Q9UNL2 185 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 MAB21L2Q9Y586 359 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 AUP1Q9Y679 476 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 DSCAML1Q8TD84 2053 aa6.08□□□□□ -1.44
PHGDH-225ENST00000641720 TMEM82A0PJX8 343 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 MEGF11A6BM72 1044 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 PRSS47A8MTI9 375 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 M0QZ24 198 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 SIRPB1O00241 398 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 SLC17A2O00624 439 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 SIGLEC5O15389 551 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 HOXA3O43365 443 aaPredicted RBP6.07□□□□□ -1.44
PHGDH-225ENST00000641720 ZNF737O75373 536 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 FOXH1O75593 365 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 GABARAPO95166 117 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 HTR3BO95264 441 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 HAND1O96004 215 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 SERPINA2P20848 420 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 PRDX2P32119 198 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 SDC2P34741 201 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 GABRA2P47869 451 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 MTNR1BP49286 362 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 RBM11P57052 281 aaKnown RBP6.07□□□□□ -1.44
PHGDH-225ENST00000641720 FGF12P61328 243 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 NCS1P62166 190 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 QRFPP83859 136 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 PLA2G7Q13093 441 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 UNC119Q13432 240 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 PDCD1Q15116 288 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 RSU1Q15404 277 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 KCNJ8Q15842 424 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 CTF1Q16619 201 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 DEFB112Q30KQ8 113 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 ESCO2Q56NI9 601 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 SPIN3Q5JUX0 258 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 HES5Q5TA89 166 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 ATPAF1Q5TC12 328 aaPredicted RBP6.07□□□□□ -1.44
PHGDH-225ENST00000641720 GPR107Q5VW38 600 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 WDR25Q64LD2 544 aaPredicted RBP6.07□□□□□ -1.44
PHGDH-225ENST00000641720 ELP2Q6IA86 826 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 OR10K2Q6IF99 312 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 BRICD5Q6PL45 260 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 METAP1DQ6UB28 335 aaPredicted RBP6.07□□□□□ -1.44
PHGDH-225ENST00000641720 NLRC3Q7RTR2 1065 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 RTN4RL2Q86UN3 420 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 PNLDC1Q8NA58 520 aaKnown RBP6.07□□□□□ -1.44
PHGDH-225ENST00000641720 ZNRF1Q8ND25 227 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 TMEM185AQ8NFB2 350 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 Q8NFD4 153 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 LINC01006Q8NI28 216 aa6.07□□□□□ -1.44
PHGDH-225ENST00000641720 CHAC2Q8WUX2 184 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms