RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 SHANK1Q9Y566 2161 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 ZFHX2Q9C0A1 2572 aaPredicted RBP8.97□□□□□ -0.97
TP53-225ENST00000619485 IGKV1-27A0A075B6S5 117 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 HSPB6O14558 160 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 TNFSF12O43508 249 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 SSSCA1O60232 199 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 PAX6P26367 422 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 RGS19P49795 217 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 CCL20P78556 96 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 HIST3H3Q16695 136 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 RSPO1Q2MKA7 263 aaPredicted RBP8.97□□□□□ -0.97
TP53-225ENST00000619485 PDZD11Q5EBL8 140 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 RTL6Q6ICC9 239 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 RABEPKQ7Z6M1 372 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 OR10AD1Q8NGE0 317 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 LYPD6BQ8NI32 183 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 SPACA9Q96E40 222 aaPredicted RBP8.97□□□□□ -0.97
TP53-225ENST00000619485 ZNF442Q9H7R0 627 aa8.97□□□□□ -0.97
TP53-225ENST00000619485 METTL1Q9UBP6 276 aaKnown RBP8.97□□□□□ -0.97
TP53-225ENST00000619485 A0A0U1RQV5 110 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 AP4M1O00189 453 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 TNFSF11O14788 317 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 SMAD7O15105 426 aaKnown RBP8.96□□□□□ -0.97
TP53-225ENST00000619485 KLF7O75840 302 aaPredicted RBP8.96□□□□□ -0.97
TP53-225ENST00000619485 CST7O76096 145 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 OR7C1O76099 320 aaPredicted RBP8.96□□□□□ -0.97
TP53-225ENST00000619485 NDUFB7P17568 137 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 CASP6P55212 293 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 LSM6P62312 80 aaKnown RBP8.96□□□□□ -0.97
TP53-225ENST00000619485 KIAA0141Q14154 515 aaPredicted RBP8.96□□□□□ -0.97
TP53-225ENST00000619485 SSPNQ14714 243 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 PCOLCEQ15113 449 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 ZNF774Q6NX45 483 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 LIAT1Q6ZQX7 453 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 LGI3Q8N145 548 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 MR1Q95460 341 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 TP53RKQ96S44 253 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 TCEAL7Q9BRU2 100 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 GINS3Q9BRX5 216 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 SLC7A11Q9UPY5 501 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 ST3GAL6Q9Y274 331 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 HDGFL3Q9Y3E1 203 aa8.96□□□□□ -0.97
TP53-225ENST00000619485 DOCK10Q96BY6 2186 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 RRP8O43159 456 aaKnown RBP8.96□□□□□ -0.98
TP53-225ENST00000619485 DHHO43323 396 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 IFNA17P01571 189 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 JMJD7P0C870 316 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 ALDH3B1P43353 468 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 NDUFA6P56556 154 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 RPS23P62266 143 aaKnown RBP8.96□□□□□ -0.98
TP53-225ENST00000619485 EWSR1Q01844 656 aaKnown RBP eCLIP8.96□□□□□ -0.98
TP53-225ENST00000619485 RHEBQ15382 184 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 ZNF674Q2M3X9 581 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 C9orf152Q5JTZ5 239 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 ZNF343Q6P1L6 599 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 MRPL14Q6P1L8 145 aaKnown RBP8.96□□□□□ -0.98
TP53-225ENST00000619485 KMT5CQ86Y97 462 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 ZNF295-AS1Q8N0V1 137 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 ALKBH3Q96Q83 286 aaPredicted RBP8.96□□□□□ -0.98
TP53-225ENST00000619485 NEU1Q99519 415 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 SYT3Q9BQG1 590 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 PTRH2Q9Y3E5 179 aaKnown RBP8.96□□□□□ -0.98
TP53-225ENST00000619485 MED13Q9UHV7 2174 aa8.96□□□□□ -0.98
TP53-225ENST00000619485 CNOT1A5YKK6 2376 aaKnown RBP8.96□□□□□ -0.98
TP53-225ENST00000619485 NKX2-6A6NCS4 301 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 SLC31A2O15432 143 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 LY86O95711 162 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 B4GALT1P15291 398 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 AADACP22760 399 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 TAGLN2P37802 199 aaKnown RBP8.95□□□□□ -0.98
TP53-225ENST00000619485 RBP2P50120 134 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 TAS2R60P59551 318 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 KCNMB1Q16558 191 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 SLC25A53Q5H9E4 307 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 TIPARPQ7Z3E1 657 aaKnown RBP8.95□□□□□ -0.98
TP53-225ENST00000619485 COMMD1Q8N668 190 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 ADPRHL1Q8NDY3 354 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 NABP1Q96AH0 204 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 DUSP23Q9BVJ7 150 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 SCRT1Q9BWW7 348 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 SUCNR1Q9BXA5 334 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 P4HTMQ9NXG6 502 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 DKKL1Q9UK85 242 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 CBY1Q9Y3M2 126 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 DMRT1Q9Y5R6 373 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 LIPGQ9Y5X9 500 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 ATMQ13315 3056 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 SPTBN2O15020 2390 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 LNP1A1A4G5 178 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 H0YL77 283 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 NTN3O00634 580 aaPredicted RBP8.95□□□□□ -0.98
TP53-225ENST00000619485 NR2C1P13056 603 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 SPINK2P20155 84 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 ATP6V0CP27449 155 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 RAB2AP61019 212 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 RUNX1Q01196 453 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 Q0VFX4 171 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 GPR157Q5UAW9 335 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 CYB5R2Q6BCY4 276 aa8.95□□□□□ -0.98
TP53-225ENST00000619485 OR2C3Q8N628 320 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms