RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 DEFB107AQ8IZN7 70 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 PGAM4Q8N0Y7 254 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SVBPQ8N300 66 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 DHRSXQ8N5I4 330 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 GJC3Q8NFK1 279 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 BPIFCQ8NFQ6 507 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 OR52J3Q8NH60 311 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SLC25A40Q8TBP6 338 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 CYGBQ8WWM9 190 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 HAVCR1Q96D42 359 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SMIM12Q96EX1 92 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 PYURFQ96I23 114 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SAMD8Q96LT4 415 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 WDFY2Q96P53 400 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 CNN2Q99439 309 aaKnown RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 FUZQ9BT04 418 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 OR2J1Q9GZK6 312 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SLITRK2Q9H156 845 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 TOR3AQ9H497 397 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 MMP26Q9NRE1 261 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 CENPMQ9NSP4 180 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 POLR3KQ9Y2Y1 108 aaPredicted RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 ADAM18Q9Y3Q7 739 aa7.18□□□□□ -1.26
GPC6-202ENST00000617456 SOX21Q9Y651 276 aaPredicted RBP7.18□□□□□ -1.26
GPC6-202ENST00000617456 TEX13DA0A0J9YY54 714 aaPredicted RBP7.17□□□□□ -1.26
GPC6-202ENST00000617456 OR6C6A6NF89 314 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 FABP12A6NFH5 140 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 NKX6-3A6NJ46 265 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 AP4M1O00189 453 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 OGG1O15527 345 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 FOXH1O75593 365 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 MPC2O95563 127 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 ABHD16AO95870 558 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 IGHV1-46P01743 117 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 MT-ND2P03891 347 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 HOXB5P09067 269 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 HOXA5P20719 270 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 C21orf33P30042 268 aaPredicted RBP7.17□□□□□ -1.26
GPC6-202ENST00000617456 RBMXP38159 391 aaKnown RBP7.17□□□□□ -1.26
GPC6-202ENST00000617456 PSMB10P40306 273 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 HMGA2P52926 109 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 HIST1H3AP68431 136 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 SCN1BQ07699 218 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 ZNF154Q13106 437 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 IL18Q14116 193 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 TBCEQ15813 527 aaPredicted RBP7.17□□□□□ -1.26
GPC6-202ENST00000617456 TMEM155Q4W5P6 130 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 MESTQ5EB52 335 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 HIST2H3PS2Q5TEC6 136 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 HIST2H2BDQ6DRA6 164 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 TBPL2Q6SJ96 375 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 SMARCD3Q6STE5 483 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 PLET1Q6UQ28 207 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 FBXW12Q6X9E4 464 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 HIST2H3AQ71DI3 136 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 C1QL4Q86Z23 238 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 DEFB108BQ8NET1 73 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 ABHD4Q8TB40 342 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 RNASE8Q8TDE3 154 aaKnown RBP7.17□□□□□ -1.26
GPC6-202ENST00000617456 RASD2Q96D21 266 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 LGALS12Q96DT0 336 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 ASB9Q96DX5 294 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 RHOVQ96L33 236 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 Q96M85 177 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 RNF2Q99496 336 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 MARVELD1Q9BSK0 173 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 TNFRSF19Q9NS68 423 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 TMEM140Q9NV12 185 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 PDP1Q9P0J1 537 aaPredicted RBP7.17□□□□□ -1.26
GPC6-202ENST00000617456 RHCGQ9UBD6 479 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 KCNG2Q9UJ96 466 aa7.17□□□□□ -1.26
GPC6-202ENST00000617456 CARHSP1Q9Y2V2 147 aaKnown RBP7.17□□□□□ -1.26
GPC6-202ENST00000617456 MDFIC2A0A1B0GVS7 189 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 UNC119BA6NIH7 251 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 SERPINE3A8MV23 424 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 M0R143 59 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 KNG1P01042 644 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 IFNA21P01568 189 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 HLA-DQB1P01920 261 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 SEMG1P04279 462 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 OR8U8P0C7N1 319 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 PPIAL4GP0DN37 164 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 CTLA4P16410 223 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 SELEP16581 610 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 HOXB6P17509 224 aaKnown RBP7.16□□□□□ -1.26
GPC6-202ENST00000617456 SRMP19623 302 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 GLRA1P23415 457 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 SLC6A6P31641 620 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 CD200P41217 278 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 RORCP51449 518 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 FGF8P55075 233 aaPredicted RBP7.16□□□□□ -1.26
GPC6-202ENST00000617456 ELLP55199 621 aaPredicted RBP7.16□□□□□ -1.26
GPC6-202ENST00000617456 UBE2G2P60604 165 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 PSG7Q13046 419 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 PYY3Q5JQD4 70 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 ZNF774Q6NX45 483 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 CPOQ8IVL8 374 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 SELENOHQ8IZQ5 122 aaKnown RBP7.16□□□□□ -1.26
GPC6-202ENST00000617456 SPICQ8N5J4 248 aa7.16□□□□□ -1.26
GPC6-202ENST00000617456 KIR3DL3Q8N743 410 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms