RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 TCRBP04435 133 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 IFNA6P05013 189 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 FCGR3AP08637 254 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 EGR1P18146 543 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 HRH1P35367 487 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 MDH2P40926 338 aaKnown RBP15.14■□□□□ 0.01
VRK3-225ENST00000601912 GLCCI1Q86VQ1 547 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 CREB3L1Q96BA8 519 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 TINAGL1Q9GZM7 467 aaPredicted RBP15.14■□□□□ 0.01
VRK3-225ENST00000601912 CBLN4Q9NTU7 201 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 WIPI2Q9Y4P8 454 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 NUBP2Q9Y5Y2 271 aa15.14■□□□□ 0.01
VRK3-225ENST00000601912 FAM221AA4D161 298 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 H7C1Q1 480 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 GOSR1O95249 250 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 AMY2AP04746 511 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 LMO1P25800 156 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 OR3A3P47888 321 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 PPOXP50336 477 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 CHRFAM7AQ494W8 412 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 RSBN1Q5VWQ0 802 aaPredicted RBP15.13■□□□□ 0.01
VRK3-225ENST00000601912 C1orf87Q8N0U7 546 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 OR51S1Q8NGJ8 323 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 OR5H2Q8NGV7 314 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 OR56B4Q8NH76 319 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 TREM2Q9NZC2 230 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 SCP2D1Q9UJQ7 156 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 CACNA1DQ01668 2161 aa15.13■□□□□ 0.01
VRK3-225ENST00000601912 A6NNC1 897 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 OR2AT4A6NND4 320 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.12■□□□□ 0.01
VRK3-225ENST00000601912 PYCARD-AS1I3L0S3 204 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 PMP2P02689 132 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 HOXA4Q00056 320 aaPredicted RBP15.12■□□□□ 0.01
VRK3-225ENST00000601912 MICBQ29980 383 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 SHEQ5VZ18 495 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 MAFIPQ8WZ33 124 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 PRRT1Q99946 306 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 VRK1Q99986 396 aaPredicted RBP15.12■□□□□ 0.01
VRK3-225ENST00000601912 MARVELD1Q9BSK0 173 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 SEBOXQ9HB31 216 aaPredicted RBP15.12■□□□□ 0.01
VRK3-225ENST00000601912 ZNF286AQ9HBT8 521 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 NAPSAO96009 420 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 CYB5R3P00387 301 aaPredicted RBP15.12■□□□□ 0.01
VRK3-225ENST00000601912 CSN2P05814 226 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 PSG2P11465 335 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 PRDX2P32119 198 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 CEBPDP49716 269 aaPredicted RBP15.12■□□□□ 0.01
VRK3-225ENST00000601912 ARPC4P59998 168 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 BTN2A1Q7KYR7 527 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 OR5AP2Q8NGF4 316 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 OR5T2Q8NGG2 359 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 UPRTQ96BW1 309 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 NUDT15Q9NV35 164 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 ANXA10Q9UJ72 324 aa15.12■□□□□ 0.01
VRK3-225ENST00000601912 POM121CA8CG34 1229 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 INMT-MINDY4F8WBC2 141 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 RNF224P0DH78 156 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 COL10A1Q03692 680 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 ZMYND11Q15326 602 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 RBMS2Q15434 407 aaKnown RBP15.11■□□□□ 0.01
VRK3-225ENST00000601912 SRSF7Q16629 238 aaKnown RBP eCLIP15.11■□□□□ 0.01
VRK3-225ENST00000601912 VAX1Q5SQQ9 334 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 PPA2Q9H2U2 334 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 TMEM165Q9HC07 324 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 ARFGEF3Q5TH69 2177 aa15.11■□□□□ 0.01
VRK3-225ENST00000601912 DOPEY1Q5JWR5 2465 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 DYSFO75923 2080 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 TRAV6A0A075B6T7 132 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 NDUFB6O95139 128 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 MUC1P15941 1255 aaPredicted RBP15.1■□□□□ 0.01
VRK3-225ENST00000601912 CD80P33681 288 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 GABRA2P47869 451 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 KCNJ3P48549 501 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 TSPAN5P62079 268 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 SCGB2B2Q4G0G5 96 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 IDO2Q6ZQW0 420 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 TMEM17Q86X19 198 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 ARRDC1Q8N5I2 433 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 PPP1R35Q8TAP8 253 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 CCL17Q92583 94 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 SLC6A7Q99884 636 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 SPOCK3Q9BQ16 436 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 RAB1BQ9H0U4 201 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 SLC2A8Q9NY64 477 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 KMT2BQ9UMN6 2715 aaPredicted RBP15.1■□□□□ 0.01
VRK3-225ENST00000601912 MYO18BQ8IUG5 2567 aa15.1■□□□□ 0.01
VRK3-225ENST00000601912 IGKV1D-17A0A075B6S4 117 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 IGHV3OR15-7A0A075B7D8 119 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 TRBV6-6A0A0A6YYG2 114 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 PSPNO60542 156 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 DHFRP00374 187 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 H2AFB2P0C5Z0 115 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 ZNF735P0CB33 412 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 RBMXP38159 391 aaKnown RBP15.09■□□□□ 0.01
VRK3-225ENST00000601912 BTG1P62324 171 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 Q6ZS49 121 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 CD177Q8N6Q3 437 aa15.09■□□□□ 0.01
VRK3-225ENST00000601912 ASCC1Q8N9N2 400 aaKnown RBP15.09■□□□□ 0.01
VRK3-225ENST00000601912 SLC25A21Q9BQT8 299 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms