RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 B4DSR2 109 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 K7N7A8 449 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 SLC33A1O00400 549 aaPredicted RBP15.6■□□□□ 0.09
CCDC9-205ENST00000600117 DEGS1O15121 323 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 FOXH1O75593 365 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 ZNF44P15621 663 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 RANBP1P43487 201 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 RPS27AP62979 156 aaKnown RBP15.6■□□□□ 0.09
CCDC9-205ENST00000600117 LCN2P80188 198 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 SPCS2Q15005 226 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 TAF9Q16594 264 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 LRRC10Q5BKY1 277 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 METAP1DQ6UB28 335 aaPredicted RBP15.6■□□□□ 0.09
CCDC9-205ENST00000600117 USP43Q70EL4 1123 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 LINC00596Q86U02 117 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 LINC01356Q8N9X3 169 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 SLC25A46Q96AG3 418 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 ISOC1Q96CN7 298 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 SNX22Q96L94 193 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 TM2D1Q9BX74 207 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 TMEM59Q9BXS4 323 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 BARHL1Q9BZE3 327 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 SHARPINQ9H0F6 387 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 FAM234AQ9H0X4 552 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 DCSTAMPQ9H295 470 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 LPAR2Q9HBW0 351 aa15.6■□□□□ 0.09
CCDC9-205ENST00000600117 SLC25A10Q9UBX3 287 aaPredicted RBP15.6■□□□□ 0.09
CCDC9-205ENST00000600117 TRAV24A0A0B4J272 114 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A10PA6NDY2 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A18PA6NE21 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A16PA6NEW6 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A20PA6NIJ5 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A8PA6NJQ4 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A7PA6NKC0 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A22PA8MWA6 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A12PA8MX19 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A5PA8MXJ8 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A23PA8MXZ1 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 C22orf46C9J442 243 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 TK1P04183 234 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 MSMBP08118 114 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A15PP0C7V4 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A13PP0C7W8 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A14PP0C7W9 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 FAM90A24PP0C7X0 464 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 SNRPBP14678 240 aaKnown RBP15.59■□□□□ 0.09
CCDC9-205ENST00000600117 OR3A1P47881 315 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 PAX2Q02962 417 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 SCN1BQ07699 218 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 MPV17LQ2QL34 196 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 CYB5R2Q6BCY4 276 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 ASCC1Q8N9N2 400 aaKnown RBP15.59■□□□□ 0.09
CCDC9-205ENST00000600117 CHST4Q8NCG5 386 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 OR4S1Q8NGB4 309 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 ST8SIA4Q92187 359 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 DACT3Q96B18 629 aaPredicted RBP15.59■□□□□ 0.09
CCDC9-205ENST00000600117 LPAR5Q9H1C0 372 aa15.59■□□□□ 0.09
CCDC9-205ENST00000600117 A0A0A6YYD4 124 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 H3BMQ9 156 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 PAHP00439 452 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 ZNF16P17020 682 aaPredicted RBP15.58■□□□□ 0.08
CCDC9-205ENST00000600117 EFNB2P52799 333 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 IDNKQ5T6J7 187 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 SIGIRRQ6IA17 410 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 CROCCP3Q8IVE0 287 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 OR8H2Q8N162 312 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 NICN1Q9BSH3 213 aa15.58■□□□□ 0.08
CCDC9-205ENST00000600117 RCC2Q9P258 522 aaKnown RBP15.58■□□□□ 0.08
CCDC9-205ENST00000600117 PKD1L1Q8TDX9 2849 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 GPR37O15354 613 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 TMEM127O75204 238 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 OR7C1O76099 320 aaPredicted RBP15.57■□□□□ 0.08
CCDC9-205ENST00000600117 NDUFB7P17568 137 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 RAB6AP20340 208 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 GABRR1P24046 479 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 C11orf91Q3C1V1 193 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 BTN2A1Q7KYR7 527 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 FAM89BQ8N5H3 189 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 LGALS14Q8TCE9 139 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 PTX4Q96A99 478 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 CYYR1Q96J86 154 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 DCTN5Q9BTE1 182 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 CHST6Q9GZX3 395 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 PPA2Q9H2U2 334 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 MMP26Q9NRE1 261 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 RAB22AQ9UL26 194 aa15.57■□□□□ 0.08
CCDC9-205ENST00000600117 LOC105371242A0A075B767 164 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 TRAV20A0A0B4J274 112 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 PPIAL4CA0A0B4J2A2 164 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 FOXI3A8MTJ6 420 aaPredicted RBP15.56■□□□□ 0.08
CCDC9-205ENST00000600117 NOL3O60936 208 aaKnown RBP15.56■□□□□ 0.08
CCDC9-205ENST00000600117 TGFAP01135 160 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 DVL1P1P54792 670 aaPredicted RBP15.56■□□□□ 0.08
CCDC9-205ENST00000600117 SCAND1P57086 179 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 GRK1Q15835 563 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 PAN3Q58A45 887 aaKnown RBP15.56■□□□□ 0.08
CCDC9-205ENST00000600117 SUMF2Q8NBJ7 301 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 LY6G5BQ8NDX9 201 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 OR5H6Q8NGV6 325 aa15.56■□□□□ 0.08
CCDC9-205ENST00000600117 C8orf46Q8TAG6 207 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms