RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CGAP01215 116 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 IFNA21P01568 189 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SERPINA5P05154 406 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 FAHP16930 419 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 CEACAM8P31997 349 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RBPJQ06330 500 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ZNF610Q8N9Z0 462 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 BCL2L2Q92843 193 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SGK3Q96BR1 496 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 OR10C1Q96KK4 312 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ANXA10Q9UJ72 324 aa12.89□□□□□ -0.35
CDK5RAP3-236ENST00000584991 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 LYZL6O75951 148 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ANOS1P23352 680 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 HTR5AP47898 357 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RAB32Q13637 225 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SMCO1Q147U7 214 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 EIF2S3LQ2VIR3 472 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 IL36GQ9NZH8 169 aa12.88□□□□□ -0.35
CDK5RAP3-236ENST00000584991 OR6C6A6NF89 314 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 MTCP1P56278 107 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 KRTAP27-1Q3LI81 207 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PCSK4Q6UW60 755 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 LRTM2Q8N967 370 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 NECAP2Q9NVZ3 263 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 OR5AC2Q9NZP5 309 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SDCBPO00560 298 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 HTR3BO95264 441 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RAB1AP62820 205 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RBM39Q14498 530 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TSC22D1Q15714 1073 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TMEM42Q69YG0 159 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 DHRS7BQ6IAN0 325 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 CPEB3Q8NE35 698 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TMED6Q8WW62 240 aa12.87□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SHANK1Q9Y566 2161 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 C5orf63A6NC05 138 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ZNF705EA8MWA4 302 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 H7C2Y5 167 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 HEXAP06865 529 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 HKR1P10072 659 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ARR3P36575 388 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RBP2P50120 134 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SULT1A2P50226 295 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 CAV2P51636 162 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 FAM3AP98173 230 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RSU1Q15404 277 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 GABRA6Q16445 453 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TMEM200AQ86VY9 491 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 OR5D18Q8NGL1 313 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SFXN3Q9BWM7 321 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SUCNR1Q9BXA5 334 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TAF9BQ9HBM6 251 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PARP11Q9NR21 331 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ZNF701Q9NV72 531 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 UQCC1Q9NVA1 299 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ATRXP46100 2492 aa12.86□□□□□ -0.35
CDK5RAP3-236ENST00000584991 A0A0G2JNJ9 132 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 MSGN1A6NI15 193 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PRSS44E7EML9 344 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 F8W036 122 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 NDUFA2O43678 99 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 DEDDO75618 318 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PI3P19957 117 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 COX5AP20674 150 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 UCP3P55916 312 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 HGFACQ04756 655 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 OR8B8Q15620 311 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 MST1LQ2TV78 715 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 BEND4Q6ZU67 534 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 CXorf67Q86X51 503 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 NANOS1Q8WY41 292 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 ELL3Q9HB65 397 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 Q9UFV3 132 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 A0A1W2PR80 420 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 K7EPK0 472 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 HOXB5P09067 269 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 OR5H8P0DN80 308 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RPL12P30050 165 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 C6orf201Q7Z4U5 140 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 DPPA2Q7Z7J5 298 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PUSL1Q8N0Z8 303 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 FAM71E2Q8N5Q1 922 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 COMMD1Q8N668 190 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 UBAC2Q8NBM4 344 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 OR10Z1Q8NGY1 313 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PIGTQ969N2 578 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 REEP6Q96HR9 211 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
CDK5RAP3-236ENST00000584991 RP1L1Q8IWN7 2480 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-236ENST00000584991 PKD1L2Q7Z442 2459 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms