RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SIGLEC14Q08ET2 396 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 SCGB2A2Q13296 93 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 WDR73Q6P4I2 378 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 SFTPA1Q8IWL2 248 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 TCTEX1D1Q8N7M0 179 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 TAAR3PQ9P1P4 343 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 SCN10AQ9Y5Y9 1956 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 ANKRD36A6QL64 1941 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 NPIPB9F8W1W9 429 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 KIR2DL1P43626 348 aaPredicted RBP9.12□□□□□ -0.95
PTPRM-205ENST00000577827 RPL29P47914 159 aaKnown RBP9.12□□□□□ -0.95
PTPRM-205ENST00000577827 ERVFC1-1P60608 527 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 SLC10A1Q14973 349 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 MS4A3Q96HJ5 214 aa9.12□□□□□ -0.95
PTPRM-205ENST00000577827 FAM103A1Q9BTL3 118 aaKnown RBP9.12□□□□□ -0.95
PTPRM-205ENST00000577827 KLF13Q9Y2Y9 288 aaPredicted RBP9.12□□□□□ -0.95
PTPRM-205ENST00000577827 ASCC3Q8N3C0 2202 aaKnown RBP9.12□□□□□ -0.95
PTPRM-205ENST00000577827 NKX2-6A6NCS4 301 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 J3QRE1 110 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 K7EQS6 105 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 RRP8O43159 456 aaKnown RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 SRFP11831 508 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 G0S2P27469 103 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 RAC3P60763 192 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 DGAT2L6Q6ZPD8 337 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 IP6K3Q96PC2 410 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 HEXA-AS1Q9H8Q6 139 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 MPC1Q9Y5U8 109 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 PDCD11Q14690 1871 aaKnown RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 ZNF638Q14966 1978 aaKnown RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 DNPH1O43598 174 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 CYB5R3P00387 301 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 CDX1P47902 265 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 FZD5Q13467 585 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 SMIM21Q3B7S5 101 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 TMEM255AQ5JRV8 349 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 BSCL2Q96G97 398 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 FOXQ1Q9C009 403 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 NPIPB13A6NJU9 1138 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 NPIPB4C9JG80 1138 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 PNLIPP16233 465 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 IL3RAP26951 378 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 FAM3BP58499 235 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 BPIFB3P59826 476 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 DHRS11Q6UWP2 260 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 SLC24A4Q8NFF2 622 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 C12orf49Q9H741 205 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 DICER1Q9UPY3 1922 aaKnown RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 IGKV1D-42A0A075B6H8 117 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 GEMIN2O14893 280 aaKnown RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 TRAF3IP2O43734 574 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 YIF1AO95070 293 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 HRASP01112 189 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 DANCRP0C864 163 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 FAM157BP0CG42 384 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 ZNF154Q13106 437 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 TRAT1Q6PIZ9 186 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 ZNF721Q8TF20 911 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 THOC3Q96J01 351 aaKnown RBP9.11□□□□□ -0.95
PTPRM-205ENST00000577827 C5orf66Q9H5L9 145 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 SLC25A22Q9H936 323 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 RPH3ALQ9UNE2 315 aa9.11□□□□□ -0.95
PTPRM-205ENST00000577827 CRYM-AS1A6NIL9 109 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 NKX6-3A6NJ46 265 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 TMEM14DPA8MWL7 114 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 SPINT1O43278 529 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 TOX4O94842 621 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 BCL2P10415 239 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 SRD5A2P31213 254 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 ZNF816Q0VGE8 651 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-205ENST00000577827 PDCD1Q15116 288 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 RTL8BQ17RB0 113 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 C6orf15Q6UXA7 325 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-205ENST00000577827 C9orf40Q8IXQ3 194 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 GAPTQ8N292 157 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 ZNF519Q8TB69 540 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 KCNK17Q96T54 332 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 GPR27Q9NS67 375 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 ANK1P16157 1881 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 CELA2BP08218 269 aaPredicted RBP9.1□□□□□ -0.95
PTPRM-205ENST00000577827 EDN3P14138 238 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 PRF1P14222 555 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 CNN1P51911 297 aaKnown RBP9.1□□□□□ -0.95
PTPRM-205ENST00000577827 VAMP3Q15836 100 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 ANKRD55Q3KP44 614 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 FAM78BQ5VT40 261 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 LINC00696Q6ZRV3 163 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 OR10C1Q96KK4 312 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 LRRC3BQ96PB8 259 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 TMEM9BQ9NQ34 198 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 CTXND1A0A1B0GTU2 59 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 KCNAB3O43448 404 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 TSPAN2O60636 221 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 FCGR3AP08637 254 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 OR10J4P0C629 311 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 OR10J1P30954 320 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 CHRNA7P36544 502 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 GABRA4P48169 554 aa9.1□□□□□ -0.95
PTPRM-205ENST00000577827 FGF8P55075 233 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms