RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 FOXRED2Q8IWF2 684 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 RCHY1Q96PM5 261 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 ADGRL4Q9HBW9 690 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 SCOCQ9UIL1 159 aa15.6■□□□□ 0.09
CCDC40-206ENST00000572083 ZNF256Q9Y2P7 627 aaPredicted RBP15.6■□□□□ 0.09
CCDC40-206ENST00000572083 A0A087X0M5 115 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 A0A1B0GX30 115 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 A0A1W2PPI3 338 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 FUOMA2VDF0 154 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 LINC01548A6NM66 108 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 ZNF670-ZNF695F2Z2N8 137 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 FGF16O43320 207 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 PRKYO43930 277 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 RBP2P50120 134 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 DIAPH2-AS1Q14236 149 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 C17orf58Q2M2W7 97 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 TEX38Q6PEX7 206 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 SSX6Q7RTT6 188 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 CATSPERDQ86XM0 798 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 YIPF7Q8N8F6 280 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 HMG20AQ9NP66 347 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 PALMDQ9NP74 551 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 PCDHB16Q9NRJ7 776 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 ZNF446Q9NWS9 450 aa15.59■□□□□ 0.09
CCDC40-206ENST00000572083 LCE6AA0A183 80 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 SH2D1BO14796 132 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 LY86O95711 162 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 SERPINA3P01011 423 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 IGKV1D-33P01593 117 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 IGKV1-33P01594 117 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 LYL1P12980 280 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 ATP1B3P54709 279 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 TRIM25Q14258 630 aaKnown RBP15.58■□□□□ 0.08
CCDC40-206ENST00000572083 ATXN7L3Q14CW9 347 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-206ENST00000572083 KRBOX4Q5JUW0 171 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 MEPCEQ7L2J0 689 aaKnown RBP15.58■□□□□ 0.08
CCDC40-206ENST00000572083 OR9G1Q8NH87 305 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 LEAP2Q969E1 77 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 COQ2Q96H96 371 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 KIRREL1Q96J84 757 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 TBX5Q99593 518 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 PPIL3Q9H2H8 161 aaKnown RBP15.58■□□□□ 0.08
CCDC40-206ENST00000572083 CLN6Q9NWW5 311 aa15.58■□□□□ 0.08
CCDC40-206ENST00000572083 AMMECR1Q9Y4X0 333 aaPredicted RBP15.58■□□□□ 0.08
CCDC40-206ENST00000572083 ZNF729A6NN14 1252 aaPredicted RBP15.57■□□□□ 0.08
CCDC40-206ENST00000572083 ZNF44P15621 663 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 MTCP1P56278 107 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 SCN1BQ07699 218 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 DOC2BQ14184 412 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 ZNF260Q3ZCT1 412 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 HSP90B2PQ58FF3 399 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 SBSPONQ8IVN8 264 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 ADGRG5Q8IZF4 528 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 RFT1Q96AA3 541 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 MNTQ99583 582 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 ADI1Q9BV57 179 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 SMAD5-AS1Q9Y6J3 95 aa15.57■□□□□ 0.08
CCDC40-206ENST00000572083 IGKV1-9A0A0C4DH69 117 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 IGKV1-12A0A0C4DH73 117 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 LOC107986453A0A1B0GWG9 222 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 J3QR06 171 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 IGKV1D-12P01611 117 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 KRT8P05787 483 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 ANXA8P13928 327 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 KIR2DS1Q14954 304 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 CXorf66Q5JRM2 361 aaPredicted RBP15.56■□□□□ 0.08
CCDC40-206ENST00000572083 CCDC124Q96CT7 223 aaKnown RBP15.56■□□□□ 0.08
CCDC40-206ENST00000572083 HRASLS5Q96KN8 279 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 LRGUKQ96M69 825 aa15.56■□□□□ 0.08
CCDC40-206ENST00000572083 AP4M1O00189 453 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 GLP1RP43220 463 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 GNG10P50151 68 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 MNAT1P51948 309 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 CRISP1P54107 249 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 BNIP1Q12981 228 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 MADCAM1Q13477 382 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 GPR50Q13585 617 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 PNLIPRP3Q17RR3 467 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 DNAAF1Q8NEP3 725 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 PP6455Q8WZ26 134 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 ADAT3Q96EY9 351 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-206ENST00000572083 COMMD4Q9H0A8 199 aa15.55■□□□□ 0.08
CCDC40-206ENST00000572083 KBTBD11-OT1A0A1B0GTJ5 212 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 B2RBV5 119 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 SLC33A1O00400 549 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-206ENST00000572083 CSN2P05814 226 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 GPR12P47775 334 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 CDX1P47902 265 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-206ENST00000572083 PDZK1IP1Q13113 114 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 LTC4SQ16873 150 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 RDH10Q8IZV5 341 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 ARHGAP24Q8N264 748 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 PRSS35Q8N3Z0 413 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 OR5D18Q8NGL1 313 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 CANT1Q8WVQ1 401 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 OR6C3Q9NZP0 311 aa15.54■□□□□ 0.08
CCDC40-206ENST00000572083 H2AFY2Q9P0M6 372 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-206ENST00000572083 NCBP2LA6PVI3 153 aaKnown RBP15.53■□□□□ 0.08
CCDC40-206ENST00000572083 HSPB6O14558 160 aa15.53■□□□□ 0.08
CCDC40-206ENST00000572083 RAB7AP51149 207 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms