RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ETV6P41212 452 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 KIR3DL2P43630 455 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 RPS11P62280 158 aaKnown RBP eCLIP5.95□□□□□ -1.46
CNOT1-222ENST00000570139 PPP3R1P63098 170 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 CACNA1BQ00975 2339 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 KLF9Q13886 244 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-222ENST00000570139 RBM39Q14498 530 aaKnown RBP5.95□□□□□ -1.46
CNOT1-222ENST00000570139 MEF2DQ14814 521 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 KRTAP27-1Q3LI81 207 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 DDI2Q5TDH0 399 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 UNQ6126/PRO20091Q6UXV3 157 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 PGAP1Q75T13 922 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 NUFIP2Q7Z417 695 aaKnown RBP5.95□□□□□ -1.46
CNOT1-222ENST00000570139 LUZP2Q86TE4 346 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 C1orf174Q8IYL3 243 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 LRRC18Q8N456 261 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 C9orf106Q8NAJ2 232 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 STEAP2Q8NFT2 490 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 OR5M9Q8NGP3 310 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 OR1F12Q8NHA8 337 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 TMEM106AQ96A25 262 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 FBXO17Q96EF6 278 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 MRPL53Q96EL3 112 aaKnown RBP5.95□□□□□ -1.46
CNOT1-222ENST00000570139 CPNE2Q96FN4 548 aaPredicted RBP5.95□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF799Q96GE5 643 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 CXorf58Q96LI9 332 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 TECTBQ96PL2 329 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 OR2H1Q9GZK4 316 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF665Q9H7R5 613 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 SLC17A5Q9NRA2 495 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 ELOVL5Q9NYP7 299 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 ABRACLQ9P1F3 81 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 CLEC4AQ9UMR7 237 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 SLC22A13Q9Y226 551 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF835Q9Y2P0 537 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 CFAP47Q6ZTR5 3102 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 ASPMQ8IZT6 3477 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 CHD8Q9HCK8 2581 aa5.95□□□□□ -1.46
CNOT1-222ENST00000570139 PTPRZ1P23471 2315 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 LOC107986453A0A1B0GWG9 222 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CLEC18AA5D8T8 446 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CLDN25C9JDP6 229 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CCSO14618 274 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 MAGEB4O15481 346 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 XRCC2O43543 280 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CDK2AP2O75956 126 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 IGLV3-1P01715 115 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ACSM4P0C7M7 580 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 GP9P14770 177 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF32P17041 273 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 SRMP19623 302 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CRYGSP22914 178 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 TUBG1P23258 451 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 PTBP1P26599 531 aaKnown RBP eCLIP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 FCGR2BP31994 310 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CEACAM8P31997 349 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 HTR5AP47898 357 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF121P58317 390 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 UBE2NP61088 152 aaKnown RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF45Q02386 682 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 MFGE8Q08431 387 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 HNRNPA0Q13151 305 aaKnown RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF846Q147U1 533 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 GSG1Q2KHT4 349 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 SPANXN2Q5MJ10 180 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 RTL6Q6ICC9 239 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 SFXN4Q6P4A7 337 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 Q6ZSR3 168 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 SKA3Q8IX90 412 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CDH26Q8IXH8 852 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 GCNT2Q8N0V5 402 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 FTMTQ8N4E7 242 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 FAM89BQ8N5H3 189 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CNEP1R1Q8N9A8 125 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CLEC18CQ8NCF0 446 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ST6GALNAC3Q8NDV1 305 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 OR6Q1Q8NGQ2 317 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 PP6455Q8WZ26 134 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 RGP1Q92546 391 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CEP19Q96LK0 163 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 KCNS3Q9BQ31 491 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 C6orf62Q9GZU0 229 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 PLEKHA1Q9HB21 404 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF71Q9NQZ8 489 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 TUBG2Q9NRH3 451 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ZNF629Q9UEG4 869 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ELF5Q9UKW6 265 aaPredicted RBP5.94□□□□□ -1.46
CNOT1-222ENST00000570139 MAB21L2Q9Y586 359 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 ARHGAP21Q5T5U3 1957 aa5.94□□□□□ -1.46
CNOT1-222ENST00000570139 CIB4A0PJX0 185 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 OVOL3O00110 214 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 AIPO00170 330 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 LRRTM2O43300 516 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 TNFSF13O75888 250 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 DHRS3O75911 302 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 TTRP02766 147 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 CD40LGP29965 261 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 APLNRP35414 380 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 TGFBR1P36897 503 aa5.93□□□□□ -1.46
CNOT1-222ENST00000570139 TALDO1P37837 337 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms