RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 POU2AF1Q16633 256 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 C9orf135Q5VTT2 229 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 H2BFWTQ7Z2G1 175 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 COMMD6Q7Z4G1 85 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 SIAH3Q8IW03 269 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 GDPD1Q8N9F7 314 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 ZFP62Q8NB50 900 aaPredicted RBP5.77□□□□□ -1.49
SMG1-217ENST00000569764 FCAMRQ8WWV6 532 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 DPCDQ9BVM2 203 aaPredicted RBP5.77□□□□□ -1.49
SMG1-217ENST00000569764 TTTY12Q9BZ98 90 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 CDIP1Q9H305 208 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 AP5S1Q9NUS5 200 aa5.77□□□□□ -1.49
SMG1-217ENST00000569764 FASNP49327 2511 aaKnown RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 OR6C6A6NF89 314 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 EI24O14681 340 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 UGT2B17O75795 530 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 UPK1BO75841 260 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 CA1P00915 261 aaPredicted RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 SFTPDP35247 375 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 RORCP51449 518 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 P2RX1P51575 399 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 POLR2HP52434 150 aaKnown RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 CRMP1Q14194 572 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TMEM176BQ3YBM2 270 aaPredicted RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 SPINK14Q6IE38 97 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ADAM5Q6NVV9 412 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ZNF431Q8TF32 576 aaPredicted RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 TAAR8Q969N4 342 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 COQ2Q96H96 371 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 WFDC6Q9BQY6 131 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 NMNAT1Q9HAN9 279 aaPredicted RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 NUFIP1Q9UHK0 495 aaKnown RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 SVILO95425 2214 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TMEM218A2RU14 115 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ZNF814B7Z6K7 855 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 SYT7O43581 403 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 IFI6P09912 130 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 UBBP0CG47 229 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TNFRSF1BP20333 461 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 MAOAP21397 527 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 FGF9P31371 208 aaPredicted RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 HBA1P69905 142 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 IKZF1Q13422 519 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TAF9Q16594 264 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TBC1D28Q2M2D7 210 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 LAS2Q8IYD9 372 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ZFP90Q8TF47 636 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 HPSE2Q8WWQ2 592 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 KCTD7Q96MP8 289 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 FYTTD1Q96QD9 318 aaKnown RBP5.76□□□□□ -1.49
SMG1-217ENST00000569764 MAP1LC3AQ9H492 121 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TMED3Q9Y3Q3 217 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 FRYQ5TBA9 3013 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 MPZL1O95297 269 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ORM1P02763 201 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 IL3P08700 152 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 F2RP25116 425 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 HSF1Q00613 529 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 DUSP2Q05923 314 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TPTE2P1Q5T6R2 138 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 C22orf42Q6IC83 251 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 LAIR2Q6ISS4 152 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 SLC48A1Q6P1K1 146 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ZNF367Q7RTV3 350 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 AMER2Q8N7J2 671 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 POC1AQ8NBT0 407 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 OR2T12Q8NG77 320 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 OR10G9Q8NGN4 311 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ZNF675Q8TD23 568 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 TFAP2CQ92754 450 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 ST6GAL2Q96JF0 529 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 MS4A10Q96PG2 267 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 DLL4Q9NR61 685 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 PKIGQ9Y2B9 76 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 U3KQ87 197 aa5.76□□□□□ -1.49
SMG1-217ENST00000569764 KIR2DS1A0A191URI9 304 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 C10orf142B7Z368 130 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 NPIPB11E5RHQ5 1161 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 TRAPPC2LH3BP13 241 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 IFNA1P01562 189 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 EPHA1P21709 976 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 PIGAP37287 484 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 TDGF1P3P51864 188 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 ZP4Q12836 540 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 ECH1Q13011 328 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 KIR2DS1Q14954 304 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 ZNF239Q16600 458 aaKnown RBP5.75□□□□□ -1.49
SMG1-217ENST00000569764 ATP1A1-AS1Q5TC04 95 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 TMPRSS11AQ6ZMR5 421 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 CCDC190Q86UF4 302 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 BAP18Q8IXM2 172 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 OR8I2Q8N0Y5 310 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 OR1B1Q8NGR6 318 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 TP53RKQ96S44 253 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 FAM60AQ9NP50 221 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 MED29Q9NX70 200 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 SLC17A3O00476 420 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 PHF1O43189 567 aaPredicted RBP5.75□□□□□ -1.49
SMG1-217ENST00000569764 TMPRSS11DO60235 418 aa5.75□□□□□ -1.49
SMG1-217ENST00000569764 LDB3O75112 727 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms