RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 PALMDQ9NP74 551 aa12.34□□□□□ -0.43
SPG7-213ENST00000566221 MALRD1Q5VYJ5 2156 aa12.34□□□□□ -0.43
SPG7-213ENST00000566221 FABP12A6NFH5 140 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 FAM25AB3EWG3 89 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 FAM25CB3EWG5 89 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 FAM25GB3EWG6 89 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 F5H0A9 414 aaPredicted RBP12.33□□□□□ -0.44
SPG7-213ENST00000566221 SIRPB1O00241 398 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 DEGS1O15121 323 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 TFF1P04155 84 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 HEXAP06865 529 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 AMY2BP19961 511 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 PPP5CP53041 499 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 SCN1BQ07699 218 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 LYPD2Q6UXB3 125 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 MFSD4AQ8N468 514 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 FAM89BQ8N5H3 189 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 FAM216BQ8N7L0 139 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 BORCS5Q969J3 196 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 PHF21AQ96BD5 680 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 NEIL1Q96FI4 390 aaPredicted RBP12.33□□□□□ -0.44
SPG7-213ENST00000566221 SOSTQ9BQB4 213 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
SPG7-213ENST00000566221 RCC2Q9P258 522 aaKnown RBP12.33□□□□□ -0.44
SPG7-213ENST00000566221 KIAA2026Q5HYC2 2103 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 A0A0A6YYD4 124 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 IGHV4-61A0A0C4DH41 118 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 SLC33A1O00400 549 aaPredicted RBP12.32□□□□□ -0.44
SPG7-213ENST00000566221 PDCD6O75340 191 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 ZNF737O75373 536 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 ELK1P19419 428 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 FUT3P21217 361 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 USF1P22415 310 aaPredicted RBP12.32□□□□□ -0.44
SPG7-213ENST00000566221 LMO1P25800 156 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 BLVRBP30043 206 aaPredicted RBP12.32□□□□□ -0.44
SPG7-213ENST00000566221 PITPNBP48739 271 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 VEGFCP49767 419 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 PITPNAQ00169 270 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 PDCD1Q15116 288 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
SPG7-213ENST00000566221 LRRC10Q5BKY1 277 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 ATAD3CQ5T2N8 411 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 RAB12Q6IQ22 244 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 CNIH2Q6PI25 160 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 GDPD1Q8N9F7 314 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 TMEM185AQ8NFB2 350 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 PPP1R35Q8TAP8 253 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 SNX22Q96L94 193 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 NEDD4LQ96PU5 975 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 NUDT16L1Q9BRJ7 211 aaKnown RBP12.32□□□□□ -0.44
SPG7-213ENST00000566221 FAM234AQ9H0X4 552 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 DIABLOQ9NR28 239 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 CTSZQ9UBR2 303 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 MAB21L2Q9Y586 359 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 WNK2Q9Y3S1 2297 aa12.32□□□□□ -0.44
SPG7-213ENST00000566221 A0A096LNT2 108 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 TRAV24A0A0B4J272 114 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 A0A1B0GW55 424 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 FOXI3A8MTJ6 420 aaPredicted RBP12.31□□□□□ -0.44
SPG7-213ENST00000566221 K7N7A8 449 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 NDUFB3O43676 98 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 GLAP06280 429 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 EIF4EP06730 217 aaKnown RBP12.31□□□□□ -0.44
SPG7-213ENST00000566221 WNT2P09544 360 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4L2P0CJ85 424 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4L3P0CJ86 424 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4L4P0CJ87 422 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4L5P0CJ88 424 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4L6P0CJ89 424 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4L7P0CJ90 424 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 SELLP14151 372 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 CHATP28329 748 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 MNDAP41218 407 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 KCNJ3P48549 501 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 NPY4RP50391 375 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 LMO4P61968 165 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 ESCO2Q56NI9 601 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 SIGIRRQ6IA17 410 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 PYHIN1Q6K0P9 492 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
SPG7-213ENST00000566221 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 CMTM4Q8IZR5 234 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 OR8H2Q8N162 312 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 SUMF2Q8NBJ7 301 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 ZNRF1Q8ND25 227 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 WFDC11Q8NEX6 87 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 OR5D13Q8NGL4 314 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 OR10R2Q8NGX6 335 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 CCDC32Q9BV29 185 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DPCDQ9BVM2 203 aaPredicted RBP12.31□□□□□ -0.44
SPG7-213ENST00000566221 PPA2Q9H2U2 334 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 ZNF581Q9P0T4 197 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 EXTL2Q9UBQ6 330 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 DUX4Q9UBX2 424 aa12.31□□□□□ -0.44
SPG7-213ENST00000566221 SLC25A10Q9UBX3 287 aaPredicted RBP12.31□□□□□ -0.44
SPG7-213ENST00000566221 VPS13CQ709C8 3753 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 ARHGAP32A7KAX9 2087 aa12.3□□□□□ -0.44
SPG7-213ENST00000566221 TMEM82A0PJX8 343 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms