RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 IFNA2P01563 188 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 IGHV2-5P01817 119 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 IGHG1P01857 330 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 PMP2P02689 132 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 IFNA6P05013 189 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CRYBA1P05813 215 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 GLAP06280 429 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CTSDP07339 412 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 HEXBP07686 556 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SFTA3P0C7M3 94 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SEC11BP0C7V7 166 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SPP1P10451 314 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 FOLR1P15328 257 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF43P17038 809 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 AKR1C4P17516 323 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 AZU1P20160 251 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 AGAP20933 346 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CPT2P23786 658 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 DTYMKP23919 212 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 PTAFRP25105 342 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CD27P26842 260 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 RPL12P30050 165 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 MAS1LP35410 378 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 GNALP38405 381 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 OR1D4P47884 311 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 P2RY1P47900 373 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 MEOX2P50222 304 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 NPY4RP50391 375 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 AKR1C2P52895 323 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 DVL1P1P54792 670 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 RAB5BP61020 215 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 HNRNPKP61978 463 aaKnown RBP eCLIP2.11□□□□□ -2.07
SPG11-223ENST00000560858 LSM6P62312 80 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 FAM3AP98173 230 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TLE3Q04726 772 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 AKR1C1Q04828 323 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 C17orf67Q0P5P2 114 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 Q0VFX4 171 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ECH1Q13011 328 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 PDZK1IP1Q13113 114 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 MYBPHQ13203 477 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ENDOGQ14249 297 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 PEA15Q15121 130 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 RHEBQ15382 184 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TSC22D1Q15714 1073 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SGCAQ16586 387 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 HYAL4Q2M3T9 481 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 RNF212Q495C1 297 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF542PQ5EBM4 170 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 LCE3CQ5T5A8 94 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TMEM42Q69YG0 159 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 RPL7L1Q6DKI1 246 aaKnown RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 RHBDD2Q6NTF9 364 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TMEM71Q6P5X7 295 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 GLIPR1L1Q6UWM5 242 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 DHRS11Q6UWP2 260 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 Q6ZRG5 221 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 KCTD9Q7L273 389 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SYT13Q7L8C5 426 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ABHD12BQ7Z5M8 362 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 ANKRD37Q7Z713 158 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 LURAP1LQ8IV03 231 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 FAM219AQ8IW50 185 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF101Q8IZC7 436 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TMEM123Q8N131 208 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 PRR18Q8N4B5 295 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 FAM71E2Q8N5Q1 922 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 FADS6Q8N9I5 356 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CHST4Q8NCG5 386 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF248Q8NDW4 579 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 LFNGQ8NES3 379 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 OR2M3Q8NG83 312 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 FNDC9Q8TBE3 224 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 OR51E1Q8TCB6 317 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF501Q96CX3 271 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 DNAJA3Q96EY1 480 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZDHHC12Q96GR4 267 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TMEM41AQ96HV5 264 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ARHGAP5-AS1Q96IT6 56 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ABHD14BQ96IU4 210 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CYYR1Q96J86 154 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 OR10C1Q96KK4 312 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 C12orf57Q99622 126 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 MICU1Q9BPX6 476 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 WDR77Q9BQA1 342 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF251Q9BRH9 671 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TCEAL7Q9BRU2 100 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 GINS3Q9BRX5 216 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TMEM231Q9H6L2 316 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TUBA4BQ9H853 241 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 PLEKHA2Q9HB19 425 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SEBOXQ9HB31 216 aaPredicted RBP2.11□□□□□ -2.07
SPG11-223ENST00000560858 TAF9BQ9HBM6 251 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 ZNF304Q9HCX3 659 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 TREM1Q9NP99 234 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 GPR84Q9NQS5 396 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 SMCO4Q9NRQ5 59 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 CENPMQ9NSP4 180 aa2.11□□□□□ -2.07
SPG11-223ENST00000560858 C1orf123Q9NWV4 160 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms