RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 C5orf49A4QMS7 147 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 OR5B21A6NL26 309 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 FAM166BA8MTA8 275 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 ZNF705EA8MWA4 302 aaPredicted RBP6.26□□□□□ -1.41
VPS13C-206ENST00000558338 TRAPPC2LH3BP13 241 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 H7C1Q1 480 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 MSTNO14793 375 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 TSPAN4O14817 238 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 SS18L1O75177 396 aaPredicted RBP6.26□□□□□ -1.41
VPS13C-206ENST00000558338 F10P00742 488 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 GLAP06280 429 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 SP1P08047 785 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 OR5AC1P0C628 307 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 S100GP29377 79 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 HOXC12P31275 282 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 APLNRP35414 380 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 MAGEA5P43359 124 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 MEOX1P50221 254 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 FXYD4P59646 89 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 RND3P61587 244 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 DEFA5Q01523 94 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 ZNF273Q14593 569 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 IL13RA2Q14627 380 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 GPR157Q5UAW9 335 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 SPAG16Q8N0X2 631 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 OR5A2Q8NGI9 324 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 GTF3AQ92664 365 aaKnown RBP6.26□□□□□ -1.41
VPS13C-206ENST00000558338 EXTL1Q92935 676 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 MRPL24Q96A35 216 aaKnown RBP6.26□□□□□ -1.41
VPS13C-206ENST00000558338 ABHD14BQ96IU4 210 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 SPIN2AQ99865 258 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 SPIN2BQ9BPZ2 258 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 NKX6-2Q9C056 277 aaPredicted RBP6.26□□□□□ -1.41
VPS13C-206ENST00000558338 RCC2Q9P258 522 aaKnown RBP6.26□□□□□ -1.41
VPS13C-206ENST00000558338 MPC1Q9Y5U8 109 aa6.26□□□□□ -1.41
VPS13C-206ENST00000558338 TNRC18O15417 2968 aaPredicted RBP6.25□□□□□ -1.41
VPS13C-206ENST00000558338 PRUNE2Q8WUY3 3088 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 TMEM218A2RU14 115 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 ANKRD30BLA7E2S9 258 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 GPR137BO60478 399 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 ATG12O94817 140 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 CDS2O95674 445 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 PPYP01298 95 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 IGHV3-9P01782 118 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 TK1P04183 234 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 CCNOP22674 350 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 IL32P24001 234 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 CD82P27701 267 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 P2RY1P47900 373 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 SULT1A2P50226 295 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 RRADP55042 308 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 PJVKQ0ZLH3 352 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 SLC10A1Q14973 349 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 RSPO4Q2I0M5 234 aaPredicted RBP6.25□□□□□ -1.41
VPS13C-206ENST00000558338 ZNF573Q86YE8 665 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 CALHM1Q8IU99 346 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 RNF152Q8N8N0 203 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 ZNF565Q8N9K5 539 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 TMEM178AQ8NBL3 297 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 MDS2Q8NDY4 140 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 SMIM8Q96KF7 97 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 C18orf12Q96KH6 178 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 TSNAXQ99598 290 aaKnown RBP6.25□□□□□ -1.41
VPS13C-206ENST00000558338 OR2S2Q9NQN1 319 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 PARP11Q9NR21 331 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 COQ3Q9NZJ6 369 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 ZNF175Q9Y473 711 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 LSM5Q9Y4Y9 91 aaKnown RBP6.25□□□□□ -1.41
VPS13C-206ENST00000558338 A0A0C4DFX4 3053 aa6.25□□□□□ -1.41
VPS13C-206ENST00000558338 TRBV6-6A0A0A6YYG2 114 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 LRP3O75074 770 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 HLA-HP01893 362 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 BCL3P20749 454 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 AADACP22760 399 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 HAAOP46952 286 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 F2RL1P55085 397 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 RAB1AP62820 205 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 TMEM268Q5VZI3 342 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 MYO7BQ6PIF6 2116 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 FBXW12Q6X9E4 464 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 LINC00696Q6ZRV3 163 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 FOXRED2Q8IWF2 684 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 COMMD1Q8N668 190 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 ZFP62Q8NB50 900 aaPredicted RBP6.24□□□□□ -1.41
VPS13C-206ENST00000558338 UBAC2Q8NBM4 344 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 HPSE2Q8WWQ2 592 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 DYRK2Q92630 601 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 SLAMF9Q96A28 289 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 MARS2Q96GW9 593 aaKnown RBP6.24□□□□□ -1.41
VPS13C-206ENST00000558338 C1orf159Q96HA4 380 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 CYYR1Q96J86 154 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 POM121L2Q96KW2 1035 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 MICU1Q9BPX6 476 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 PKIBQ9C010 78 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 Q9N2K0 584 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 TMEM9BQ9NQ34 198 aa6.24□□□□□ -1.41
VPS13C-206ENST00000558338 FAM212BQ9NTI7 297 aaPredicted RBP6.24□□□□□ -1.41
VPS13C-206ENST00000558338 ZNF629Q9UEG4 869 aaPredicted RBP6.24□□□□□ -1.41
VPS13C-206ENST00000558338 FBXL17Q9UF56 701 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms