RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PLA2G2AP14555 144 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 RBMS1P29558 406 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 NPBWR2P48146 333 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 BIDP55957 195 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 LCN6P62502 163 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 CX3CL1P78423 397 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 MRPS10P82664 201 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 EWSR1Q01844 656 aaKnown RBP eCLIP4.33□□□□□ -1.72
SRP54-211ENST00000556445 EIF2B1Q14232 305 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 HNF4GQ14541 408 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 SLC17A1Q14916 467 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 PYDC2Q56P42 97 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 ACER2Q5QJU3 275 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 IDNKQ5T6J7 187 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 HES3Q5TGS1 186 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 TMEM244Q5VVB8 128 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 TRIQKQ629K1 86 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 SFXN4Q6P4A7 337 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 UNQ6126/PRO20091Q6UXV3 157 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 ZNF562Q6V9R5 426 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 SSX6Q7RTT6 188 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 TIPARPQ7Z3E1 657 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 P4HA3Q7Z4N8 544 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 ZNF554Q86TJ5 538 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 C8orf31Q8N9H6 132 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 CCDC54Q8NEL0 328 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 NOXO1Q8NFA2 376 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 OR2G2Q8NGZ5 317 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 OR52N5Q8NH56 324 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 ZNF524Q96C55 264 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 KLHDC3Q9BQ90 382 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 FAM173AQ9BQD7 235 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 UTP23Q9BRU9 249 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 TMEM204Q9BSN7 226 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 MCRIP2Q9BUT9 160 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 PARD6GQ9BYG4 376 aaPredicted RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 SRRQ9GZT4 340 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 C1orf198Q9H425 327 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 MOB1AQ9H8S9 216 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 B3GAT2Q9NPZ5 323 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 PAQR5Q9NXK6 330 aaPredicted RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 STMN3Q9NZ72 180 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 CKLFQ9UBR5 152 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 MRM2Q9UI43 246 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 SPATA2Q9UM82 520 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 V9GY05 133 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 C5orf42Q9H799 3197 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 KNTC1P50748 2209 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 CPAMD8Q8IZJ3 1885 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 RANBP2P49792 3224 aaKnown RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 A0A1B0GVG6 124 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 FUOMA2VDF0 154 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 TRABD2BA6NFA1 517 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 PCNX2A6NKB5 2137 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 OR4C45A6NMZ5 311 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 CENPXA8MT69 81 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 AIPO00170 330 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 RAB29O14966 203 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 SIVA1O15304 175 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 TRAF3IP2O43734 574 aaPredicted RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 EFNA2O43921 213 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 RPP14O95059 124 aaKnown RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 TNFSF15O95150 251 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 HLA-DQB1P01920 261 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 H2BFMP0C1H6 154 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 PGA4P0DJD7 388 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 PGA3P0DJD8 388 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 SLC2A2P11168 524 aaPredicted RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 IL7P13232 177 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 CTLA4P16410 223 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 NPR2P20594 1047 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 CSRP1P21291 193 aaKnown RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 CFHR2P36980 270 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 P2RY1P47900 373 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 CSNK1A1P48729 337 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 CDC34P49427 236 aaPredicted RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 NOVA1P51513 510 aaKnown RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 HCCSP53701 268 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 AP3S2P59780 193 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 LSM6P62312 80 aaKnown RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 H3F3AP84243 136 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 OC90Q02509 493 aaPredicted RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 SRYQ05066 204 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 ASAH1Q13510 395 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 TAB1Q15750 504 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 UBE2NLQ5JXB2 153 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 DCAF10Q5QP82 559 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 AGAP7PQ5VUJ5 663 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 GLT8D1Q68CQ7 371 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 FAM122CQ6P4D5 195 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 CNIH2Q6PI25 160 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 C17orf107Q6ZR85 190 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 C5orf24Q7Z6I8 188 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 Q8N402 240 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 LRTM2Q8N967 370 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 SLC26A10Q8NG04 563 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 RNF133Q8WVZ7 376 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 ZNRF4Q8WWF5 429 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 DEDD2Q8WXF8 326 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms