RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 ODAMA1E959 279 aa14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 CDX1P47902 265 aaPredicted RBP14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 PNLIPRP3Q17RR3 467 aa14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 SPIN3Q5JUX0 258 aa14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 Q8IYB0 196 aa14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 OR9G1Q8NH87 305 aa14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 KIRREL1Q96J84 757 aa14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 CNN2Q99439 309 aaKnown RBP14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 CHST5Q9GZS9 411 aa14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 PPIL3Q9H2H8 161 aaKnown RBP14.83□□□□□ -0.04
SUPT16H-203ENST00000555752 SYT7O43581 403 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 FRMD6-AS1P0C7T7 363 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 PRKACGP22612 351 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 CDC42P60953 191 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 SCN1BQ07699 218 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 GPR50Q13585 617 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 FAM98BQ52LJ0 330 aaKnown RBP14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 CXorf66Q5JRM2 361 aaPredicted RBP14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 SSX6Q7RTT6 188 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 SLC35F2Q8IXU6 374 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 HMG20AQ9NP66 347 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 EXOSC4Q9NPD3 245 aaKnown RBP14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 SORL1Q92673 2214 aa14.82□□□□□ -0.04
SUPT16H-203ENST00000555752 IGKV1-9A0A0C4DH69 117 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 IGKV1-12A0A0C4DH73 117 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 J3QR06 171 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 M0R129 80 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 SH2D1BO14796 132 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 GATBO75879 557 aaKnown RBP14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 CST1P01037 141 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 IGKV1D-12P01611 117 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 GPR12P47775 334 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 MS4A2Q01362 244 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 FHL3Q13643 280 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 ATXN7L3Q14CW9 347 aaPredicted RBP14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 KRBOX4Q5JUW0 171 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 C16orf89Q6UX73 402 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 RFT1Q96AA3 541 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 RBMXL1Q96E39 390 aaKnown RBP14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 HRASLS5Q96KN8 279 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 CITED4Q96RK1 184 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 ADGRL4Q9HBW9 690 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 SLC25A19Q9HC21 320 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 PCDHB16Q9NRJ7 776 aa14.81□□□□□ -0.04
SUPT16H-203ENST00000555752 IGHV3-72A0A0B4J1Y9 119 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 ZNF729A6NN14 1252 aaPredicted RBP14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 AP4M1O00189 453 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 PRKYO43930 277 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 RBP2P50120 134 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 GNG10P50151 68 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 FOXE3Q13461 319 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 LTC4SQ16873 150 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 ASPHD1Q5U4P2 390 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 DHFR2Q86XF0 187 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 CATSPERDQ86XM0 798 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 TAGLN3Q9UI15 199 aa14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 AMMECR1Q9Y4X0 333 aaPredicted RBP14.8□□□□□ -0.04
SUPT16H-203ENST00000555752 KBTBD11-OT1A0A1B0GTJ5 212 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 FUOMA2VDF0 154 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 NCBP2LA6PVI3 153 aaKnown RBP14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 CCRL2O00421 344 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 HCKP08631 526 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 ZNF44P15621 663 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 ATP1B3P54709 279 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 MTCP1P56278 107 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 MADCAM1Q13477 382 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 SPATS1Q496A3 300 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 RDH10Q8IZV5 341 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 YIPF7Q8N8F6 280 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 RNF152Q8N8N0 203 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 OR11H1Q8NG94 326 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 C4orf3Q8WVX3 66 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 TBX5Q99593 518 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 FAM107BQ9H098 131 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 PSG11Q9UQ72 335 aa14.79□□□□□ -0.04
SUPT16H-203ENST00000555752 A0A1W2PPE3 182 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 ZNF670-ZNF695F2Z2N8 137 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 SLC33A1O00400 549 aaPredicted RBP14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 CYB5AP00167 134 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 CGB3P0DN86 165 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 CGB7P0DN87 165 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 RAP2AP10114 183 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 REG1BP48304 166 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 ACTR3P61158 418 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 PDZK1IP1Q13113 114 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 FAM53AQ6NSI3 398 aaPredicted RBP14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 Q6P435 159 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 Q8N9W7 124 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 ADAT3Q96EY9 351 aaPredicted RBP14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 EAF1Q96JC9 268 aaPredicted RBP14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 ABCG5Q9H222 651 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 ZMAT4Q9H898 229 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 ZNF556Q9HAH1 456 aa14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 ARGLU1Q9NWB6 273 aaPredicted RBP14.78□□□□□ -0.04
SUPT16H-203ENST00000555752 HSPB6O14558 160 aa14.77□□□□□ -0.05
SUPT16H-203ENST00000555752 SERPINA3P01011 423 aa14.77□□□□□ -0.05
SUPT16H-203ENST00000555752 CSN2P05814 226 aa14.77□□□□□ -0.05
SUPT16H-203ENST00000555752 ELANEP08246 267 aa14.77□□□□□ -0.05
SUPT16H-203ENST00000555752 GLP1RP43220 463 aa14.77□□□□□ -0.05
SUPT16H-203ENST00000555752 RAB7AP51149 207 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms