RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, human

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPAS3-204	ENST00000546849	OR2L8	Q8NGY9	312 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	OR4S2	Q8NH73	311 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	ZNF502	Q8TBZ5	544 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	SLC38A4	Q969I6	547 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	ECHDC3	Q96DC8	303 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	ZNF578	Q96N58	590 aa	Predicted RBP	3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	SLC29A1	Q99808	456 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	DCUN1D5	Q9BTE7	237 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	CCDC32	Q9BV29	185 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	BBS2	Q9BXC9	721 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	TPT1P8	Q9HAU6	139 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	DIABLO	Q9NR28	239 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	TAS2R9	Q9NYW1	312 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	PDP1	Q9P0J1	537 aa	Predicted RBP	3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	ENPP5	Q9UJA9	477 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	ZNF229	Q9UJW7	825 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	ANKRD12	Q6UB98	2062 aa		3.85	□□□□□ -1.79
NPAS3-204	ENST00000546849	SMG1	Q96Q15	3661 aa	Known RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CEP250	Q9BV73	2442 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	VPS13A	Q96RL7	3174 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	ZNF638	Q14966	1978 aa	Known RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	DOCK3	Q8IZD9	2030 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	LINC00854	A0A1B0GVQ3	168 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	OR2AG2	A6NM03	316 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	ZNF716	A6NP11	495 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	EFCAB9	A8MZ26	197 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849		C9JVG2	144 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	FAAH	O00519	579 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CCL22	O00626	93 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	MYL12B	O14950	172 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	RAB29	O14966	203 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CASC3	O15234	703 aa	Known RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	ACOX3	O15254	700 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	AIRE	O43918	545 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	OR1I1	O60431	355 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	PSIP1	O75475	530 aa	Known RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	GADD45G	O95257	159 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CPSF4	O95639	269 aa	Known RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	PTTG1	O95997	202 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	PDYN	P01213	254 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	ZNF735	P0CB33	412 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	C1GALT1C1L	P0DN25	315 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	HMGA1	P17096	107 aa	Known RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	HRH1	P35367	487 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	GPR1	P46091	355 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	PRLHR	P49683	370 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	FOXA1	P55317	472 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	ERCC8	Q13216	396 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	PDGFRL	Q15198	375 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	TRAM1	Q15629	374 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	ZNF404	Q494X3	552 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	SYT6	Q5T7P8	510 aa	Predicted RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	RAET1L	Q5VY80	246 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	REEP3	Q6NUK4	255 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	RPL13AP3	Q6NVV1	102 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	AGTRAP	Q6RW13	159 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CALHM3	Q86XJ0	350 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	TRAPPC5	Q8IUR0	188 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	PRSS58	Q8IYP2	241 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CMTM8	Q8IZV2	173 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	HSD17B11	Q8NBQ5	300 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	OR10G4	Q8NGN3	311 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CDC26	Q8NHZ8	85 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	MCFD2	Q8NI22	146 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	HAVCR2	Q8TDQ0	301 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	OR5P2	Q8WZ92	322 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	COPS4	Q9BT78	406 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	MND1	Q9BWT6	205 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	KRTAP4-3	Q9BYR4	195 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	NOX3	Q9HBY0	568 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	CCDC59	Q9P031	241 aa	Known RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	VAPA	Q9P0L0	249 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	RAB23	Q9ULC3	237 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	SSR3	Q9UNL2	185 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	SLC22A14	Q9Y267	594 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	RNF11	Q9Y3C5	154 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	MN1	Q10571	1320 aa	Predicted RBP	3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	BRWD1	Q9NSI6	2320 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	SPEG	Q15772	3267 aa		3.84	□□□□□ -1.79
NPAS3-204	ENST00000546849	NLRC5	Q86WI3	1866 aa		3.84	□□□□□ -1.8
NPAS3-204	ENST00000546849	GBF1	Q92538	1859 aa		3.84	□□□□□ -1.8
NPAS3-204	ENST00000546849	NYNRIN	Q9P2P1	1898 aa	Known RBP	3.84	□□□□□ -1.8
NPAS3-204	ENST00000546849	CHD5	Q8TDI0	1954 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	SCN8A	Q9UQD0	1980 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	IGKV2-28	A0A075B6P5	120 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	ARPC4-TTLL3	A0A0A6YYG9	625 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	IGHV3-66	A0A0C4DH42	116 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	ZNF816-ZNF321P	A0A0X1KG74	233 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	TSPAN11	A1L157	253 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	FAM25A	B3EWG3	89 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	FAM25C	B3EWG5	89 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	FAM25G	B3EWG6	89 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	CCRL2	O00421	344 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	SCN2B	O60939	215 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	IGKV2D-28	P01615	120 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	HMGN1	P05114	100 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	CRYGB	P07316	175 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	PIP	P12273	146 aa	Predicted RBP	3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	CD36	P16671	472 aa		3.83	□□□□□ -1.8
NPAS3-204	ENST00000546849	S100A1	P23297	94 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms