RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TLN1Q9Y490 2541 aaKnown RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 NRASP01111 189 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 S100A9P06702 114 aaKnown RBP14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF14P17017 642 aaPredicted RBP14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 NFYBP25208 207 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 TMEM128Q5BJH2 165 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 TMEM42Q69YG0 159 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 RBMS3Q6XE24 437 aaKnown RBP14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 CXorf67Q86X51 503 aaPredicted RBP14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 TERB2Q8NHR7 220 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 PIGCQ92535 297 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 NICN1Q9BSH3 213 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 MMP26Q9NRE1 261 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 FAM230AA0A1W2PPH8 454 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 FAM157CP0CG43 387 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 SMIM6P0DI80 62 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 PTGER4P35408 488 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 ID4P47928 161 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 IDH3GP51553 393 aaPredicted RBP14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 PNLDC1Q8NA58 520 aaKnown RBP14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 BANF2Q9H503 90 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 FBLN5Q9UBX5 448 aa14.67□□□□□ -0.06
PCDHB17P-201ENST00000539533 IGKV1-27A0A075B6S5 117 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 AGFG2O95081 481 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 CBR1P16152 277 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 MTCP1P56278 107 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 MALLQ13021 153 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF600Q6ZNG1 722 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 WDR31Q8NA23 367 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 OR56B2PQ8NGI1 322 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF251Q9BRH9 671 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 CRIM1Q9NZV1 1036 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 MSGN1A6NI15 193 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 MPIG6BO95866 241 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 TIMP3P35625 211 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 MRPL21Q7Z2W9 205 aaKnown RBP14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 C5orf66Q9H5L9 145 aa14.66□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZGRF1Q86YA3 2104 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 A0A0A6YYD4 124 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF816-ZNF321PA0A0X1KG74 233 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 NPY4RP50391 375 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 RAB5BP61020 215 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 MST1LQ2TV78 715 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 IL34Q6ZMJ4 242 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 DOLPP1Q86YN1 238 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 TMEM230Q96A57 120 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 SPSB1Q96BD6 273 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 SEC11CQ9BY50 192 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 LPAR5Q9H1C0 372 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 NIT2Q9NQR4 276 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 UQCC1Q9NVA1 299 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 TINAGQ9UJW2 476 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 GPR132Q9UNW8 380 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 PRR14LQ5THK1 2151 aa14.65□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF850A8MQ14 1090 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 ZNF705EA8MWA4 302 aaPredicted RBP14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 CDC14BO60729 498 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 ADAP1O75689 374 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 CRTAPO75718 401 aaPredicted RBP14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 HEXAP06865 529 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 CHRM2P08172 466 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 PJVKQ0ZLH3 352 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 HABP2Q14520 560 aaPredicted RBP14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 CNN3Q15417 329 aaKnown RBP14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 SLC9A3R2Q15599 337 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 TBC1D28Q2M2D7 210 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 VAX1Q5SQQ9 334 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 PRSS54Q6PEW0 395 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 CLEC18BQ6UXF7 455 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 BHLHE23Q8NDY6 225 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 KCNG3Q8TAE7 436 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 RAB18Q9NP72 206 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 OR5AC2Q9NZP5 309 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 LPAR3Q9UBY5 353 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 ANAPC10Q9UM13 185 aa14.65□□□□□ -0.07
PCDHB17P-201ENST00000539533 SFT2D2O95562 160 aa14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 S100A8P05109 93 aa14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 GLI4P10075 376 aa14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 PLCXD3Q63HM9 321 aa14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 GFRALQ6UXV0 394 aa14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 C1orf162Q8NEQ5 155 aaPredicted RBP14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 CPNE2Q96FN4 548 aaPredicted RBP14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 PRR13Q9NZ81 148 aa14.64□□□□□ -0.07
PCDHB17P-201ENST00000539533 SPRY1O43609 319 aaPredicted RBP14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 GSTP1P09211 210 aaKnown RBP14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 LYL1P12980 280 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 HOXC12P31275 282 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 CEACAM8P31997 349 aaPredicted RBP14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 ALDH3B1P43353 468 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 HAAOP46952 286 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 RBP2P50120 134 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 PEA15Q15121 130 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 PLAC9Q5JTB6 97 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 SPATA46Q5T0L3 261 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 ZNF474Q6S9Z5 364 aaPredicted RBP14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 BEND4Q6ZU67 534 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 ARRDC1Q8N5I2 433 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 RAB3CQ96E17 227 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 BORCS8Q96FH0 119 aa14.63□□□□□ -0.07
PCDHB17P-201ENST00000539533 BOD1Q96IK1 185 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms