RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 BCL6BQ8N143 479 aaPredicted RBP10.75□□□□□ -0.69
CHFR-216ENST00000538235 OSR2Q8N2R0 312 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 OR13F1Q8NGS4 319 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 THRSPQ92748 146 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 TNFRSF14Q92956 283 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 UPRTQ96BW1 309 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 POM121Q96HA1 1249 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 MED30Q96HR3 178 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 Q96M66 194 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 UQCC2Q9BRT2 126 aa10.75□□□□□ -0.69
CHFR-216ENST00000538235 EXOSC4Q9NPD3 245 aaKnown RBP10.75□□□□□ -0.69
CHFR-216ENST00000538235 TRAV1-2A0A0B4J238 106 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 TRAV40A0A0B4J280 105 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 FOXI3A8MTJ6 420 aaPredicted RBP10.74□□□□□ -0.69
CHFR-216ENST00000538235 MMP23AO75900 390 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 ARL6IP5O75915 188 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 CYB5AP00167 134 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 CHRM2P08172 466 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 PPIAL4GP0DN37 164 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 MGMTP16455 207 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 GALP22466 123 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 GLIPR1P48060 266 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 EFNB2P52799 333 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 CAPZA1P52907 286 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 ARF6P62330 175 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 SCN1BQ07699 218 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 TMEM200BQ69YZ2 307 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 C5orf24Q7Z6I8 188 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 FAM185AQ8N0U4 392 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 PNKDQ8N490 385 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 BPIFB2Q8N4F0 458 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 SNX22Q96L94 193 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 METTL9Q9H1A3 318 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 SIRT7Q9NRC8 400 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 RCC2Q9P258 522 aaKnown RBP10.74□□□□□ -0.69
CHFR-216ENST00000538235 ST3GAL6Q9Y274 331 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 AUP1Q9Y679 476 aa10.74□□□□□ -0.69
CHFR-216ENST00000538235 TRAV39A0A0B4J263 110 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 LOC100506127A0A0U1RQW1 187 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 MDFIC2A0A1B0GVS7 189 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 J3QLI3 93 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 MPIG6BO95866 241 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 ZNF44P15621 663 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 GABRR1P24046 479 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 CFPP27918 469 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 HTR2CP28335 458 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 NCS1P62166 190 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 LSM3P62310 102 aaKnown RBP10.73□□□□□ -0.69
CHFR-216ENST00000538235 AESQ08117 197 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 GRK1Q15835 563 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 RSBN1Q5VWQ0 802 aaPredicted RBP10.73□□□□□ -0.69
CHFR-216ENST00000538235 PNLDC1Q8NA58 520 aaKnown RBP10.73□□□□□ -0.69
CHFR-216ENST00000538235 OR51D1Q8NGF3 324 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 OR6M1Q8NGM8 313 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 C22orf15Q8WYQ4 148 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 DGCR14Q96DF8 476 aaKnown RBP10.73□□□□□ -0.69
CHFR-216ENST00000538235 ZNF48Q96MX3 618 aaPredicted RBP10.73□□□□□ -0.69
CHFR-216ENST00000538235 WDFY2Q96P53 400 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 PCGF1Q9BSM1 259 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 FUNDC2Q9BWH2 189 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 FAM234AQ9H0X4 552 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 LPAR5Q9H1C0 372 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 RHOFQ9HBH0 211 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 ING3Q9NXR8 418 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 ONECUT1Q9UBC0 465 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 ZNF69Q9UC07 566 aa10.73□□□□□ -0.69
CHFR-216ENST00000538235 TMEM272A0A1B0GTI8 110 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 MEGF11A6BM72 1044 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 RNASEK-C17orf49H0YIS7 233 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 GATA3P23771 443 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 SDC2P34741 201 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 P2RX3P56373 397 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 EDDM3BP56851 147 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 RPL31P62899 125 aaKnown RBP10.72□□□□□ -0.69
CHFR-216ENST00000538235 LDLRAD2Q5SZI1 272 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 GLT8D1Q68CQ7 371 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 FAM53AQ6NSI3 398 aaPredicted RBP10.72□□□□□ -0.69
CHFR-216ENST00000538235 BRD3OSQ6XYD6 125 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 VMO1Q7Z5L0 202 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 CROCCP3Q8IVE0 287 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 PDZD9Q8IXQ8 264 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 SUMF2Q8NBJ7 301 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 CPNE2Q96FN4 548 aaPredicted RBP10.72□□□□□ -0.69
CHFR-216ENST00000538235 AJUBAQ96IF1 538 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 SELENOIQ9C0D9 397 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 IFT22Q9H7X7 185 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 PTTG2Q9NZH5 202 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 FBLN5Q9UBX5 448 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 V9GY05 133 aa10.72□□□□□ -0.69
CHFR-216ENST00000538235 TRBV23-1A0A0A0MS06 115 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 CENPVL3A0A0U1RRI6 287 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 IFITM5A6NNB3 132 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 SH2D1BO14796 132 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 DEGS1O15121 323 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 CRTAPO75718 401 aaPredicted RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 OR7C1O76099 320 aaPredicted RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 ECDO95905 644 aaPredicted RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 CSN2P05814 226 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 CGB3P0DN86 165 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 CGB7P0DN87 165 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms