RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 TRUB2O95900 331 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 SLC16A8O95907 504 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MT-ND4P03905 459 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ICAM1P05362 532 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 EIF4EP06730 217 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 IL3P08700 152 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MMP7P09237 267 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 SMIM10L2AP0DMW4 78 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SMIM10L2BP0DMW5 78 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PNMTP11086 282 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ACP2P11117 423 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 EPCAMP16422 314 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CYP2F1P24903 491 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 F2RP25116 425 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PSMB5P28074 263 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CMPK1P30085 196 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MIPP30301 263 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 OR1D2P34982 312 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CHI3L1P36222 383 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 ARL2P36404 184 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 DLSTP36957 453 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 GABRA2P47869 451 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TFPI2P48307 235 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SULT1A2P50226 295 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 GZMMP51124 257 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 RND2P52198 227 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PDX1P52945 283 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 RIPPLY3P57055 190 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 S100A10P60903 97 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 UBE2NP61088 152 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 UFM1P61960 85 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SNRPD1P62314 119 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 RPL7AP62424 266 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 RPL23AP62750 156 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 RPS15P62841 145 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 RPS25P62851 125 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 SELENOWP63302 87 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PAFAH1B2P68402 229 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CRADDP78560 199 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 RPL24P83731 157 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 CYCSP99999 105 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 RAB40BQ12829 278 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PPP1R8Q12972 351 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 ZNF154Q13106 437 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SRSF6Q13247 344 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 FZD2Q14332 565 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 GINS1Q14691 196 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TGIF1Q15583 401 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CEBPEQ15744 281 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 VAMP3Q15836 100 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 BATFQ16520 125 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 POU2AF1Q16633 256 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MEP1BQ16820 701 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 QRICH1Q2TAL8 776 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ACOT6Q3I5F7 207 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 IFI44LQ53G44 452 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PDZD11Q5EBL8 140 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ZNF789Q5FWF6 425 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PHYHD1Q5SRE7 291 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TMEM69Q5SWH9 247 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ZNF678Q5SXM1 525 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TPTE2P1Q5T6R2 138 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 C1orf189Q5VU69 101 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SYPL2Q5VXT5 272 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PODNL1Q6PEZ8 512 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 WDR82Q6UXN9 313 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TEX43Q6ZNM6 134 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 LINC00696Q6ZRV3 163 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 COX15Q7KZN9 410 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 COMMD6Q7Z4G1 85 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MOGAT3Q86VF5 341 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 APOBEC3FQ8IUX4 373 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 DND1Q8IYX4 353 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 CMTM1Q8IZ96 169 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CMTM8Q8IZV2 173 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 LGI3Q8N145 548 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 FAM71E2Q8N5Q1 922 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 KLHDC1Q8N7A1 406 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ARIH2OSQ8N7S6 290 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ZFP41Q8N8Y5 198 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ACOT4Q8N9L9 421 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 NHLRC2Q8NBF2 726 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 LFNGQ8NES3 379 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SLC26A10Q8NG04 563 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 OR10G3Q8NGC4 313 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 OR9K2Q8NGE7 335 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 OR4B1Q8NGF8 309 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 OR52L1Q8NGH7 329 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 OR5B3Q8NH48 314 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ZNF519Q8TB69 540 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SFXN5Q8TD22 340 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 Q8WTZ3 238 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TWIST2Q8WVJ9 160 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SKA2Q8WVK7 121 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 TNFAIP8L1Q8WVP5 186 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SPRYD4Q8WW59 207 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 DNAJB3Q8WWF6 145 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 RAB40AQ8WXH6 277 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 FAM3CQ92520 227 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SUSD6Q92537 303 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms