RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 NUDT10Q8NFP7 164 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 ZNRF4Q8WWF5 429 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 SARGQ9BW04 601 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 IL19Q9UHD0 177 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 PDCD11Q14690 1871 aaKnown RBP10.78□□□□□ -0.68
BDNF-218ENST00000533246 RAB29O14966 203 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 HMGB3O15347 200 aaKnown RBP10.78□□□□□ -0.68
BDNF-218ENST00000533246 LYZL6O75951 148 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 METTL15P1P0C7V9 234 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 SMIM10L1P0DMW3 83 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 SRPXP78539 464 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 FAHD2BQ6P2I3 314 aaPredicted RBP10.78□□□□□ -0.68
BDNF-218ENST00000533246 LHFPL2Q6ZUX7 228 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 C1orf210Q8IVY1 113 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 FAHD2AQ96GK7 314 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 SMIM10Q96HG1 83 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 NIPSNAP3BQ9BS92 247 aa10.78□□□□□ -0.68
BDNF-218ENST00000533246 CDC14BO60729 498 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 NPSP0C0P6 89 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 PMP22Q01453 160 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 TRA2AQ13595 282 aaKnown RBP eCLIP10.77□□□□□ -0.68
BDNF-218ENST00000533246 KLF9Q13886 244 aaPredicted RBP10.77□□□□□ -0.68
BDNF-218ENST00000533246 ADIRFQ15847 76 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 ZNF660Q6AZW8 331 aaPredicted RBP10.77□□□□□ -0.68
BDNF-218ENST00000533246 OR2Y1Q8NGV0 311 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 SNX22Q96L94 193 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 PCED1AQ9H1Q7 454 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 HEXA-AS1Q9H8Q6 139 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 PRDM6Q9NQX0 595 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 AK3Q9UIJ7 227 aa10.77□□□□□ -0.68
BDNF-218ENST00000533246 GDF9O60383 454 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 HPP00738 406 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 ASAH2BP0C7U1 165 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 KITLGP21583 273 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 THBS4P35443 961 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 DRAM2Q6UX65 266 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 HDHD3Q9BSH5 251 aaPredicted RBP10.77□□□□□ -0.69
BDNF-218ENST00000533246 RTL8AQ9BWD3 113 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 CCDC187A0A096LP49 1063 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 F6UZH7 168 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 PDGFBP01127 241 aaPredicted RBP10.77□□□□□ -0.69
BDNF-218ENST00000533246 CD37P11049 281 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 HNRNPA3P51991 378 aaKnown RBP10.77□□□□□ -0.69
BDNF-218ENST00000533246 RAG2P55895 527 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 MOGAT2Q3SYC2 334 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 TOMM20LQ6UXN7 152 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 TMEM104Q8NE00 496 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 OR4A16Q8NH70 328 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 KCNE4Q8WWG9 221 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 CTHRC1Q96CG8 243 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 TMEM9BQ9NQ34 198 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 OPN4Q9UHM6 478 aa10.77□□□□□ -0.69
BDNF-218ENST00000533246 ERRFI1Q9UJM3 462 aaPredicted RBP10.77□□□□□ -0.69
BDNF-218ENST00000533246 SCN4AP35499 1836 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 SPINT2O43291 252 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 TBPP20226 339 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 SCGB2A2Q13296 93 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 ZNF573Q86YE8 665 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 SCCPDHQ8NBX0 429 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 OR6X1Q8NH79 312 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 MESP1Q9BRJ9 268 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 TRGV5A0A0B4J1U4 118 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 C7orf66A4D0T2 115 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 FUT6P51993 359 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 GPX8Q8TED1 209 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 SLC39A7Q92504 469 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 TCFL5Q9UL49 500 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 SCN5AQ14524 2016 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 RNF212BA8MTL3 300 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 DEFB108AA8MXU0 73 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 TGFBR3LH3BV60 316 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 BCL2L11O43521 198 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 MT-CO3P00414 261 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 TAS2R30P59541 319 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 PRAMEF6Q5VXH4 476 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 H2BFWTQ7Z2G1 175 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 CATSPERDQ86XM0 798 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 ZADH2Q8N4Q0 377 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 MALSU1Q96EH3 234 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 ZNF407Q9C0G0 2248 aa10.76□□□□□ -0.69
BDNF-218ENST00000533246 TIAF1O95411 115 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 ADRA2CP18825 462 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 ZNF816Q0VGE8 651 aaPredicted RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 DCAF12L2Q5VW00 463 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 CD200R1LQ6Q8B3 271 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 TAAR9Q96RI9 348 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 GLRX2Q9NS18 164 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 KIAA2026Q5HYC2 2103 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 MPDZO75970 2070 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 RGPD4Q7Z3J3 1758 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 IGKV1D-42A0A075B6H8 117 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 A0A087WV48 116 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 TMEM229AB2RXF0 380 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 CRYAAP02489 173 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 OR8U8P0C7N1 319 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 RAC3P60763 192 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 FHL5Q5TD97 284 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms