RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 A0A1W2PR64 198 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 A0A1W2PRV1 198 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 PMS2P1A4D2B8 440 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 IGHEP01854 428 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 FABP1P07148 127 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 P2RY4P51582 365 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 UBE2G2P60604 165 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 PDLIM3Q53GG5 364 aaPredicted RBP10.77□□□□□ -0.69
SCN3B-206ENST00000530277 NHLRC3Q5JS37 347 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 FNDC7Q5VTL7 733 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 PMS2CLQ68D20 193 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 BTNL3Q6UXE8 466 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 PIK3IP1Q96FE7 263 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 TLNRD1Q9H1K6 362 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 MSL2Q9HCI7 577 aa10.77□□□□□ -0.69
SCN3B-206ENST00000530277 ACKR3P25106 362 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 FLI1Q01543 452 aaPredicted RBP10.76□□□□□ -0.69
SCN3B-206ENST00000530277 PUSL1Q8N0Z8 303 aaKnown RBP10.76□□□□□ -0.69
SCN3B-206ENST00000530277 OR10S1Q8NGN2 331 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 KCNE4Q8WWG9 221 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 HPSE2Q8WWQ2 592 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 OR2H1Q9GZK4 316 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 PCED1AQ9H1Q7 454 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 GPR35Q9HC97 309 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 TMEM38BQ9NVV0 291 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 RASL12Q9NYN1 266 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 GHRLQ9UBU3 117 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 CACNA1AO00555 2505 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 LRRK1Q38SD2 2015 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 C3orf85A0A1B0GTC6 90 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 SCTP09683 121 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 LSM6P62312 80 aaKnown RBP10.76□□□□□ -0.69
SCN3B-206ENST00000530277 DEFA6Q01524 100 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 C1orf100Q5SVJ3 147 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 JMJD6Q6NYC1 403 aaPredicted RBP10.76□□□□□ -0.69
SCN3B-206ENST00000530277 SLC25A47Q6Q0C1 308 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 TBC1D26Q86UD7 250 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 LINC00518Q8N0U6 118 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 PLEKHF2Q9H8W4 249 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 CACNG5Q9UF02 275 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 PCNX3Q9H6A9 2034 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 TRGV5A0A0B4J1U4 118 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 PRR19A6NJB7 356 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 PPYP01298 95 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 ERVK-16P61578 105 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 ZNF154Q13106 437 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 OR8B8Q15620 311 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 HES3Q5TGS1 186 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 RGS7BPQ6MZT1 257 aaPredicted RBP10.76□□□□□ -0.69
SCN3B-206ENST00000530277 UBALD2Q8IYN6 164 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 TMEM178AQ8NBL3 297 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 DEFB124Q8NES8 71 aa10.76□□□□□ -0.69
SCN3B-206ENST00000530277 UBE2L5PA0A1B0GUS4 154 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 MDKP21741 143 aaPredicted RBP10.75□□□□□ -0.69
SCN3B-206ENST00000530277 SLC35G3Q8N808 338 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 ABHD5Q8WTS1 349 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 AQP3Q92482 292 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 APOBEC3DQ96AK3 386 aaPredicted RBP10.75□□□□□ -0.69
SCN3B-206ENST00000530277 FAM173AQ9BQD7 235 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 UNKLQ9H9P5 680 aaKnown RBP10.75□□□□□ -0.69
SCN3B-206ENST00000530277 B3GAT1Q9P2W7 334 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 PLXNB3Q9ULL4 1909 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 SPAARA0A1B0GVQ0 90 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 E9PQ18 207 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 OR2A4O95047 310 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 CST4P01036 141 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 IFNA1P01562 189 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 HOXD4P09016 255 aaPredicted RBP10.75□□□□□ -0.69
SCN3B-206ENST00000530277 CEACAM6P40199 344 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 PCOLCEQ15113 449 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 ZNF573Q86YE8 665 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 OR2C3Q8N628 320 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 DNASE2BQ8WZ79 361 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 LHX4Q969G2 390 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 OR2A7Q96R45 310 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 C19orf12Q9NSK7 152 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 SERTAD4Q9NUC0 356 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 ZNF581Q9P0T4 197 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 IL36RNQ9UBH0 155 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 RPH3ALQ9UNE2 315 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 GPR132Q9UNW8 380 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 CFAP54Q96N23 3096 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 FIGNL2A6NMB9 653 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 SYNGR1O43759 233 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 MT-CO3P00414 261 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 NPBWR1P48145 328 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 GABRA4P48169 554 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 CEBPDP49716 269 aaPredicted RBP10.75□□□□□ -0.69
SCN3B-206ENST00000530277 FAM185AQ8N0U4 392 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 MRGPRDQ8TDS7 321 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 MUCL1Q96DR8 90 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 AURKAIP1Q9NWT8 199 aaPredicted RBP10.75□□□□□ -0.69
SCN3B-206ENST00000530277 IGHV1-45A0A0A0MS14 117 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 SPRY3O43610 288 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 CHST1O43916 411 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 CD1AP06126 327 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 MUC1P15941 1255 aaPredicted RBP10.75□□□□□ -0.69
SCN3B-206ENST00000530277 FSTP19883 344 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 CYB5R2Q6BCY4 276 aa10.75□□□□□ -0.69
SCN3B-206ENST00000530277 ETV3LQ6ZN32 361 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms