RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CASQ2O14958 399 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-213ENST00000527897 OGG1O15527 345 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 MMP23AO75900 390 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 HTR3BO95264 441 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 OR3A4PP47883 348 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 MTNR1BP49286 362 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 RAB13P51153 203 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 ASPHD2Q6ICH7 369 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 Q6P435 159 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 DYNAPQ8N1N2 210 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 FOXRED1Q96CU9 486 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-213ENST00000527897 GAL3ST2Q9H3Q3 398 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 ZNF696Q9H7X3 374 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 DCLRE1BQ9H816 532 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 NKX1-2Q9UD57 310 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-213ENST00000527897 UBE2J1Q9Y385 318 aaPredicted RBP12.59□□□□□ -0.39
CAPN1-213ENST00000527897 TBL2Q9Y4P3 447 aaKnown RBP12.59□□□□□ -0.39
CAPN1-213ENST00000527897 HILPDAQ9Y5L2 63 aa12.59□□□□□ -0.39
CAPN1-213ENST00000527897 IGHV2-26A0A0B4J1V2 119 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 A0A1W2PPK0 400 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 ODF3BA8MYP8 253 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 CDRT1O95170 752 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 CDK2P24941 298 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 ERP29P30040 261 aaKnown RBP12.58□□□□□ -0.4
CAPN1-213ENST00000527897 BDKRB2P30411 391 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 GABRA5P31644 462 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF93P35789 620 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-213ENST00000527897 KRTAP10-3P60369 221 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 PIGYQ3MUY2 71 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 PAN3Q58A45 887 aaKnown RBP12.58□□□□□ -0.4
CAPN1-213ENST00000527897 PRR31Q5SQ13 230 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 SLC35E4Q6ICL7 350 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 LAIR2Q6ISS4 152 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF529Q6P280 563 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 BAIAP2L2Q6UXY1 529 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 CHST4Q8NCG5 386 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 PXT1Q8NFP0 134 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 RPS4Y2Q8TD47 263 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 S100A13Q99584 98 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 CLEC7AQ9BXN2 247 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.4
CAPN1-213ENST00000527897 TMEM133Q9H2Q1 129 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 TMEM138Q9NPI0 162 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 CNOT2Q9NZN8 540 aaKnown RBP12.58□□□□□ -0.4
CAPN1-213ENST00000527897 CKLFQ9UBR5 152 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 PSORS1C1Q9UIG5 152 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 SIGLEC9Q9Y336 463 aa12.58□□□□□ -0.4
CAPN1-213ENST00000527897 ODAMA1E959 279 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 JUNBP17275 347 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-213ENST00000527897 LMO1P25800 156 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 C21orf33P30042 268 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-213ENST00000527897 PTGFRP43088 359 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 GLP1RP43220 463 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 PROK1P58294 105 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 SLC34A1Q06495 639 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 RIPK1Q13546 671 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 LDLRAD2Q5SZI1 272 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 DMKNQ6E0U4 476 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-213ENST00000527897 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 TMEM219Q86XT9 240 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 OR4C13Q8NGP0 309 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 MALSU1Q96EH3 234 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 COQ2Q96H96 371 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 METTL9Q9H1A3 318 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 C16orf95Q9H693 158 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 TCF7L1Q9HCS4 588 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 RAB18Q9NP72 206 aa12.57□□□□□ -0.4
CAPN1-213ENST00000527897 ERICH4A6NGS2 130 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 FAM90A8PA6NJQ4 464 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 TSPAN9O75954 239 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 CSTBP04080 98 aaKnown RBP12.56□□□□□ -0.4
CAPN1-213ENST00000527897 ALDOBP05062 364 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 CELP19835 753 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 SERPINA2P20848 420 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 TAS2R43P59537 309 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 AANATQ16613 207 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 Q499Y3 187 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 YIF1BQ5BJH7 314 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 ABHD12Q8N2K0 398 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 OR4D6Q8NGJ1 314 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 PIFOQ8TCI5 191 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 OR14A2Q96R54 314 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 ZNF184Q99676 751 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-213ENST00000527897 CITED1Q99966 193 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 MGAM2Q2M2H8 2515 aa12.56□□□□□ -0.4
CAPN1-213ENST00000527897 TRAV8-7A0A075B6U6 113 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 MEIKINA0A087WXM9 373 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 TRBV5-5A0A0J9YX44 114 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 MAGEA13PA6NCF6 341 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 PTGES3LE9PB15 166 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 F2RL2O00254 374 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 CHST1O43916 411 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 OR7C1O76099 320 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-213ENST00000527897 CSN2P05814 226 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 NFYBP25208 207 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 HTR1DP28221 377 aa12.55□□□□□ -0.4
CAPN1-213ENST00000527897 GDNFP39905 211 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms