RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 OR10R2Q8NGX6 335 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 MCFD2Q8NI22 146 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 RAB3CQ96E17 227 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 DPCDQ9BVM2 203 aaPredicted RBP7.89□□□□□ -1.15
CLN8-203ENST00000518780 SSBP3Q9BWW4 388 aaPredicted RBP7.89□□□□□ -1.15
CLN8-203ENST00000518780 ATG5Q9H1Y0 275 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLN8-203ENST00000518780 PLEKHJ1Q9NW61 149 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 COMMD3Q9UBI1 195 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 SLC25A10Q9UBX3 287 aaPredicted RBP7.89□□□□□ -1.15
CLN8-203ENST00000518780 CLN8Q9UBY8 286 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 PEX16Q9Y5Y5 336 aa7.89□□□□□ -1.15
CLN8-203ENST00000518780 DYSFO75923 2080 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 A0A0B4J203 849 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 TRAV24A0A0B4J272 114 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 A0A1W2PPH5 198 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 FOXI3A8MTJ6 420 aaPredicted RBP7.88□□□□□ -1.15
CLN8-203ENST00000518780 SERPINE3A8MV23 424 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 B4DSR2 109 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 DVL1O14640 695 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 XRCC3O43542 346 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 CLPXO76031 633 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 GSTP1P09211 210 aaKnown RBP7.88□□□□□ -1.15
CLN8-203ENST00000518780 GATA3P23771 443 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 CHATP28329 748 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 S100A5P33763 92 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 TALDO1P37837 337 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 VEGFCP49767 419 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 GZMKP49863 264 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 GNB2P62879 340 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 PITPNAQ00169 270 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 MEF2CQ06413 473 aaPredicted RBP7.88□□□□□ -1.15
CLN8-203ENST00000518780 GRK1Q15835 563 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 PAN3Q58A45 887 aaKnown RBP7.88□□□□□ -1.15
CLN8-203ENST00000518780 ATAD3CQ5T2N8 411 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 WDR25Q64LD2 544 aaPredicted RBP7.88□□□□□ -1.15
CLN8-203ENST00000518780 LYPD2Q6UXB3 125 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 C17orf107Q6ZR85 190 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 GDPD3Q7L5L3 318 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 BATF2Q8N1L9 274 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 ASCC1Q8N9N2 400 aaKnown RBP7.88□□□□□ -1.15
CLN8-203ENST00000518780 SUMF2Q8NBJ7 301 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 ZNRF1Q8ND25 227 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 WFDC11Q8NEX6 87 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 TMEM185AQ8NFB2 350 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 OR5H6Q8NGV6 325 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 C8orf46Q8TAG6 207 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 SLC25A38Q96DW6 304 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 DCUN1D5Q9BTE7 237 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 SHARPINQ9H0F6 387 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 IL36RNQ9UBH0 155 aa7.88□□□□□ -1.15
CLN8-203ENST00000518780 CREBBPQ92793 2442 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 TMEM82A0PJX8 343 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 RNF223E7ERA6 249 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 SIRPB1O00241 398 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 SOCS1O15524 211 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 RGS5O15539 181 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 PSPNO60542 156 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 FOSL1P15407 271 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 HIST1H1DP16402 221 aaKnown RBP7.87□□□□□ -1.15
CLN8-203ENST00000518780 MNDAP41218 407 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 OR3A1P47881 315 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 EFNB2P52799 333 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 SNU13P55769 128 aaKnown RBP7.87□□□□□ -1.15
CLN8-203ENST00000518780 TMEM50BP56557 158 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 HOXA4Q00056 320 aaPredicted RBP7.87□□□□□ -1.15
CLN8-203ENST00000518780 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 SIGIRRQ6IA17 410 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 SLC35E4Q6ICL7 350 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 METAP1DQ6UB28 335 aaPredicted RBP7.87□□□□□ -1.15
CLN8-203ENST00000518780 BAIAP2L2Q6UXY1 529 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 ZNF554Q86TJ5 538 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 CMTM4Q8IZR5 234 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 GAPTQ8N292 157 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 FAM216BQ8N7L0 139 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 ZNF565Q8N9K5 539 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 WDFY2Q96P53 400 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 NICN1Q9BSH3 213 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 C6orf62Q9GZU0 229 aaPredicted RBP7.87□□□□□ -1.15
CLN8-203ENST00000518780 RAB9BQ9NP90 201 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 PTTG2Q9NZH5 202 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 CTSZQ9UBR2 303 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 ITGB1BP2Q9UKP3 347 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 MGAT4AQ9UM21 535 aa7.87□□□□□ -1.15
CLN8-203ENST00000518780 SETXQ7Z333 2677 aaKnown RBP7.87□□□□□ -1.15
CLN8-203ENST00000518780 TANC2Q9HCD6 1990 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 LOC105371242A0A075B767 164 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 A0A0A6YYD4 124 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 TRBV6-6A0A0A6YYG2 114 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 TRAV20A0A0B4J274 112 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 hADV38S2A0JD32 116 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 TMEM30CPA0ZSE6 113 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 FAM25AB3EWG3 89 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 FAM25CB3EWG5 89 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 FAM25GB3EWG6 89 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 CTDSP2O14595 271 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 ENSAO43768 121 aaKnown RBP7.86□□□□□ -1.15
CLN8-203ENST00000518780 HPGDSO60760 199 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 MELTFP08582 738 aa7.86□□□□□ -1.15
CLN8-203ENST00000518780 NDUFB7P17568 137 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms