RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 DEGS1O15121 323 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 OR7C1O76099 320 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 GABARAPO95166 117 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 AVPP01185 164 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 TK1P04183 234 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 CHRM2P08172 466 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 SERPINB10P48595 397 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 EDDM3BP56851 147 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 PAX2Q02962 417 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 IL13RA2Q14627 380 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 GRK1Q15835 563 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 CR1LQ2VPA4 569 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 TIMM50Q3ZCQ8 353 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 SPIN3Q5JUX0 258 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 FAHD2BQ6P2I3 314 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 CLVS1Q8IUQ0 354 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 LURAP1LQ8IV03 231 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 CDH26Q8IXH8 852 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 BPIFB2Q8N4F0 458 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 ZNF561Q8N587 486 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 OR51T1Q8NGJ9 327 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 DYRK2Q92630 601 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 DACT3Q96B18 629 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 FOXRED1Q96CU9 486 aaPredicted RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 FAHD2AQ96GK7 314 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 MED30Q96HR3 178 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 NICN1Q9BSH3 213 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 DCTN5Q9BTE1 182 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 TMPRSS13Q9BYE2 586 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 DNTTIP1Q9H147 329 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 DAPK2Q9UIK4 370 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 SCOCQ9UIL1 159 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 RPUSD1Q9UJJ7 312 aaKnown RBP8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 INSIG2Q9Y5U4 225 aa8.1□□□□□ -1.11
TOPBP1-209ENST00000513818 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 SONP18583 2426 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 IGHV3OR16-10A0A075B7F0 116 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 A0A0G2JMP0 313 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 A0A0X1KG70 313 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 TMEM272A0A1B0GTI8 110 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 A0A1W2PQ09 198 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 IFITM5A6NNB3 132 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 TMEM14DPA8MWL7 114 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 K7N7A8 449 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 SH2D1BO14796 132 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 PAHP00439 452 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 CD37P11049 281 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 GTF2F2P13984 249 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 SNRPBP14678 240 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 ARSBP15848 533 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 CCL3L1P16619 93 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 NPY4RP50391 375 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 EFNB2P52799 333 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 QRFPP83859 136 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 ZNF273Q14593 569 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 PAN3Q58A45 887 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 NKAPLQ5M9Q1 402 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 ATAD3CQ5T2N8 411 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 SFXN4Q6P4A7 337 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 TCF23Q7RTU1 214 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 OR8H2Q8N162 312 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 Q8NFD4 153 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 OR4M2Q8NGB6 313 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 NDNFQ8TB73 568 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 PLPPR1Q8TBJ4 325 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 LGALS14Q8TCE9 139 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 RAB40AQ8WXH6 277 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 FAM3DQ96BQ1 224 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 COQ2Q96H96 371 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 SNX22Q96L94 193 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 Q96M66 194 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 TMEM59Q9BXS4 323 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 SHARPINQ9H0F6 387 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 ONECUT1Q9UBC0 465 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 STEAP1Q9UHE8 339 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 GLS2Q9UI32 602 aa8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 NSD1Q96L73 2696 aaPredicted RBP8.09□□□□□ -1.11
TOPBP1-209ENST00000513818 TRBV23-1A0A0A0MS06 115 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 TRAV39A0A0B4J263 110 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 PPIAL4CA0A0B4J2A2 164 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 NOTOA8MTQ0 251 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 AIPO00170 330 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 ST8SIA5O15466 376 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 ENSAO43768 121 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 ZNF780AO75290 641 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 UBBP0CG47 229 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 PPIAL4GP0DN37 164 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 RPL5P46777 297 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 BMXP51813 675 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 ERVFRD-1P60508 538 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 ARF6P62330 175 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 RPS27AP62979 156 aaKnown RBP8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 AESQ08117 197 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 CTF1Q16619 201 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 C2orf76Q3KRA6 126 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 NHLRC3Q5JS37 347 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM120AOSQ5T036 256 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 IDNKQ5T6J7 187 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms