RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 FOXRED1Q96CU9 486 aaPredicted RBP9.8□□□□□ -0.84
CLDND1-223ENST00000511081 TMEM133Q9H2Q1 129 aa9.8□□□□□ -0.84
CLDND1-223ENST00000511081 RAB18Q9NP72 206 aa9.8□□□□□ -0.84
CLDND1-223ENST00000511081 EXOSC1Q9Y3B2 195 aaKnown RBP9.8□□□□□ -0.84
CLDND1-223ENST00000511081 MINOS1-NBL1R4GNA1 71 aa9.8□□□□□ -0.84
CLDND1-223ENST00000511081 IGHV2-26A0A0B4J1V2 119 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 MEX3AA1L020 520 aaKnown RBP9.79□□□□□ -0.84
CLDND1-223ENST00000511081 A6NDX4 124 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 FAM90A22PA8MWA6 464 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 SIRPB1O00241 398 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 SLC33A1O00400 549 aaPredicted RBP9.79□□□□□ -0.84
CLDND1-223ENST00000511081 MMP23AO75900 390 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 IGLV1-47P01700 117 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 ARG1P05089 322 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 HCKP08631 526 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 TMEM225BP0DP42 221 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 RAB3AP20336 220 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 CD34P28906 385 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 GLIPR1P48060 266 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 MTNR1BP49286 362 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 AESQ08117 197 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 LY6EQ16553 131 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 LRRC36Q1X8D7 754 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 OGFRL1Q5TC84 451 aaPredicted RBP9.79□□□□□ -0.84
CLDND1-223ENST00000511081 DMKNQ6E0U4 476 aaPredicted RBP9.79□□□□□ -0.84
CLDND1-223ENST00000511081 C11orf88Q6PI97 169 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 CCBE1Q6UXH8 406 aaPredicted RBP9.79□□□□□ -0.84
CLDND1-223ENST00000511081 Q8N2B8 174 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 SETD9Q8NE22 299 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 OR51A2Q8NGJ7 313 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 GGHQ92820 318 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 COQ2Q96H96 371 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 TMEM80Q96HE8 168 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 PLCXD1Q9NUJ7 323 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 CLEC2DQ9UHP7 191 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 ZNF281Q9Y2X9 895 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 PCDHGB5Q9Y5G0 923 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 PRKDCP78527 4128 aaKnown RBP9.79□□□□□ -0.84
CLDND1-223ENST00000511081 TGP01266 2768 aa9.79□□□□□ -0.84
CLDND1-223ENST00000511081 A0A087X0M5 115 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TRGV10A0A0A0MS01 117 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TRBV5-5A0A0J9YX44 114 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 A0A1B0GX30 115 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 ODAMA1E959 279 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 GABRPO00591 440 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 DEGS1O15121 323 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 CHST1O43916 411 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 CD2P06729 351 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 IGFBP3P17936 291 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-223ENST00000511081 GABRA5P31644 462 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 PTGFRP43088 359 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 RAB13P51153 203 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 SNU13P55769 128 aaKnown RBP9.78□□□□□ -0.84
CLDND1-223ENST00000511081 RPS11P62280 158 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLDND1-223ENST00000511081 BDH1Q02338 343 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 IL13RA2Q14627 380 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 RCN1Q15293 331 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 SSX2Q16385 188 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 NHLRC3Q5JS37 347 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 OR52W1Q6IF63 320 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 RTN4RL2Q86UN3 420 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TSEN15Q8WW01 171 aaKnown RBP9.78□□□□□ -0.84
CLDND1-223ENST00000511081 CYGBQ8WWM9 190 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 GHSRQ92847 366 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TMEM106AQ96A25 262 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 SMIM19Q96E16 107 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 CPNE2Q96FN4 548 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-223ENST00000511081 CLEC7AQ9BXN2 247 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TCF7L1Q9HCS4 588 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TMEM138Q9NPI0 162 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 CNOT2Q9NZN8 540 aaKnown RBP9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TCF19Q9Y242 345 aa9.78□□□□□ -0.84
CLDND1-223ENST00000511081 TRAV24A0A0B4J272 114 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 M0QZ24 198 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 CD1AP06126 327 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 GNAO1P09471 354 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 ZNF44P15621 663 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 CAPGP40121 348 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 SOX2P48431 317 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 SCN1BQ07699 218 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 ST3GAL4Q11206 333 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 C17orf58Q2M2W7 97 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 ABHD12Q8N2K0 398 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 OR4P4Q8NGL7 312 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 WIPF2Q8TF74 440 aaPredicted RBP9.77□□□□□ -0.85
CLDND1-223ENST00000511081 CFHR4Q92496 578 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 PGLYRP3Q96LB9 341 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 GAL3ST2Q9H3Q3 398 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 IFT22Q9H7X7 185 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 TAS2R4Q9NYW5 299 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 IL36GQ9NZH8 169 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 DPM3Q9P2X0 92 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 PSORS1C1Q9UIG5 152 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 PITPNC1Q9UKF7 332 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 SIGLEC9Q9Y336 463 aa9.77□□□□□ -0.85
CLDND1-223ENST00000511081 TRBV5-7A0A0A0MS05 114 aa9.76□□□□□ -0.85
CLDND1-223ENST00000511081 KBTBD11-OT1A0A1B0GTJ5 212 aa9.76□□□□□ -0.85
CLDND1-223ENST00000511081 EFCAB10A6NFE3 127 aa9.76□□□□□ -0.85
CLDND1-223ENST00000511081 ZNF729A6NN14 1252 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms