RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 INSIG2Q9Y5U4 225 aa-0.3□□□□□ -2.46
CLOCK-207ENST00000508049 USH1CQ9Y6N9 552 aa-0.3□□□□□ -2.46
CLOCK-207ENST00000508049 MACF1Q9UPN3 7388 aaKnown RBP-0.3□□□□□ -2.46
CLOCK-207ENST00000508049 DICER1Q9UPY3 1922 aaKnown RBP-0.3□□□□□ -2.46
CLOCK-207ENST00000508049 POLR3AO14802 1390 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 GLI3P10071 1580 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 PTPRJQ12913 1337 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 WDR19Q8NEZ3 1342 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 DOCK3Q8IZD9 2030 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 IGHV3-15A0A0B4J1V0 119 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TRAV8-4A0A0B4J246 113 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 LOC389332A0A1B0GUA5 103 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 DHRS12A0PJE2 317 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 VPS37CA5D8V6 355 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SLC22A20A6NK97 555 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 GOLGA8JA6NMD2 632 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 A8MWP6 167 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 CXCL11O14625 94 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 EIF3HO15372 352 aaKnown RBP eCLIP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 EEF1E1O43324 174 aaKnown RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 DENRO43583 198 aaKnown RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 ZNF737O75373 536 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 B3GALNT1O75752 331 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 PLEKHA8P1O95397 391 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TDP2O95551 362 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 NPPAP01160 153 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 P01737 135 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 GUSBP08236 651 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 GOLGA8HP0CJ92 632 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 MYL2P10916 166 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 ATF1P18846 271 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 EVI2BP34910 448 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SPAM1P38567 509 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 IDH3GP51553 393 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 RAP1GDS1P52306 607 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 OR2B6P58173 313 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 MTPNP58546 118 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 ZNF90Q03938 601 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 LAMTOR4Q0VGL1 99 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 CDK5R1Q15078 307 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SURF2Q15527 256 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 PSG3Q16557 428 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TTMPQ5BVD1 217 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TTC32Q5I0X7 151 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 CLEC12AQ5QGZ9 265 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 FAM27D1Q5T7N8 215 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 LAIR2Q6ISS4 152 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 CLEC19AQ6UXS0 136 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 LCA10Q71F78 164 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 FP248Q71RG6 208 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 NDUFAF7Q7L592 441 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 ZCCHC7Q8N3Z6 543 aaKnown RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 EIF1ADQ8N9N8 165 aaKnown RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TTC29Q8NA56 475 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 FER1L6-AS1Q8NA97 138 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 CYB561A3Q8NBI2 242 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 ZNF439Q8NDP4 499 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 OR10Z1Q8NGY1 313 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 LHFPL5Q8TAF8 219 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 ITFG1Q8TB96 612 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 C16orf78Q8WTQ4 265 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 KCTD4Q8WVF5 259 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SLC38A4Q969I6 547 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 C8orf44Q96CB5 159 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SMIM8Q96KF7 97 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SCGB3A2Q96PL1 93 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 UPK3BQ9BT76 320 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TAPBPLQ9BX59 468 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TM6SF2Q9BZW4 377 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SLC7A5P2Q9GIP4 190 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 C20orf96Q9NUD7 363 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TXNL4BQ9NX01 149 aaKnown RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 PEF1Q9UBV8 284 aaKnown RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 TFR2Q9UP52 801 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 STK38LQ9Y2H1 464 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 ASB3Q9Y575 518 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 PTPRZ1P23471 2315 aaPredicted RBP-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 CCDC88AQ3V6T2 1871 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 SMARCA4P51532 1647 aa-0.31□□□□□ -2.46
CLOCK-207ENST00000508049 IGF2RP11717 2491 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 E9PCH4 1651 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 KCNE1BA0A087WTH5 132 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 TMSB15BA0A087X1C1 80 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 IGHV2OR16-5A0A0B4J2B6 119 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 IGKV1-12A0A0C4DH73 117 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 LOC100653049A0A140TA62 436 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 KBTBD11-OT1A0A1B0GTJ5 212 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 OR2AT4A6NND4 320 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CD300LBA8K4G0 201 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 H0YCG3 227 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 H3BPC8 53 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 BCKDKO14874 412 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 GEMIN2O14893 280 aaKnown RBP-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 GNRH2O43555 120 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 SCN2BO60939 215 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 DNAJB6O75190 326 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 KRT34O76011 436 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 OR2F2O95006 317 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 CCNB2O95067 398 aa-0.32□□□□□ -2.46
CLOCK-207ENST00000508049 SOD1P00441 154 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms