RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 LRPPRCP42704 1394 aaKnown RBP1.59□□□□□ -2.16
SUB1-204ENST00000504016 JCADQ9P266 1359 aa1.59□□□□□ -2.16
SUB1-204ENST00000504016 IGHV2OR16-5A0A0B4J2B6 119 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 C1orf232A0A0U1RR37 186 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 SMIM23A6NLE4 172 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 GGTLC3B5MD39 225 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 UBDO15205 165 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 CRXO43186 299 aaPredicted RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 OR2A4O95047 310 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 CBR1P16152 277 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 SYT1P21579 422 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 PSMB9P28065 219 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 KDELR2P33947 212 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 RPA3P35244 121 aaPredicted RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 P2RY2P41231 377 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 UBE2IP63279 158 aaKnown RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 STX4Q12846 297 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 FLOT2Q14254 428 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 TMEM241Q24JQ0 296 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 BSXQ3C1V8 233 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 CDNFQ49AH0 187 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 RBM48Q5RL73 367 aaKnown RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 SYT6Q5T7P8 510 aaPredicted RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 KCTD16Q68DU8 428 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 UGT2A3Q6UWM9 527 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 FAM231DQ6ZW35 169 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 MRPL52Q86TS9 123 aaKnown RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 CYP4Z1Q86W10 505 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 NELFCDQ8IXH7 590 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 LINC00337Q8N6G1 96 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 DNAAF3Q8N9W5 541 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 ZNF738Q8NE65 137 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 OR4K2Q8NGD2 314 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 OR5H2Q8NGV7 314 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 OR5AK3PQ8NH89 298 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 NT5CQ8TCD5 201 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 TNFRSF14Q92956 283 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 SLC25A44Q96H78 314 aaPredicted RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 RILPQ96NA2 401 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 SERPINB11Q96P15 392 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 OR2A7Q96R45 310 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 C20orf144Q9BQM9 153 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 ZNF251Q9BRH9 671 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 COA1Q9GZY4 146 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 SPANXB1Q9NS25 103 aaPredicted RBP1.58□□□□□ -2.16
SUB1-204ENST00000504016 RBM22Q9NW64 420 aaKnown RBP eCLIP1.58□□□□□ -2.165e-8■■■■□ 20.6
SUB1-204ENST00000504016 DNAJC27Q9NZQ0 273 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 TRAPPC1Q9Y5R8 145 aa1.58□□□□□ -2.16
SUB1-204ENST00000504016 SIGLEC1Q9BZZ2 1709 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 CACNA1DQ01668 2161 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 ZNF729A6NN14 1252 aaPredicted RBP1.57□□□□□ -2.16
SUB1-204ENST00000504016 F8VP50 259 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 hCG_2039718K7EN88 272 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 FABP7O15540 132 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 SCN2BO60939 215 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 NIPSNAP2O75323 286 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 SC5DO75845 299 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 SNAP29O95721 258 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 PET100P0DJ07 73 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 CD40LGP29965 261 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 PLTPP55058 493 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 ATP5J2P56134 94 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 MLF1P58340 268 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 UBE2KP61086 200 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 MAGOHP61326 146 aaKnown RBP1.57□□□□□ -2.16
SUB1-204ENST00000504016 SKP1P63208 163 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 IFFO1Q0D2I5 559 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 TOMM34Q15785 309 aaPredicted RBP1.57□□□□□ -2.16
SUB1-204ENST00000504016 TNXAQ16473 311 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 TMEM249Q2WGJ8 235 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 NDUFAF6Q330K2 333 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 MRPL2Q5T653 305 aaKnown RBP1.57□□□□□ -2.16
SUB1-204ENST00000504016 HBMQ6B0K9 141 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 PTRHD1Q6GMV3 140 aaKnown RBP1.57□□□□□ -2.16
SUB1-204ENST00000504016 ZNF773Q6PK81 442 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 TMPPEQ6ZT21 453 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 SETD3Q86TU7 594 aaPredicted RBP1.57□□□□□ -2.16
SUB1-204ENST00000504016 AMN1Q8IY45 258 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 CCNYL1Q8N7R7 359 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 OR8G5Q8NG78 346 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 C2orf15Q8WU43 125 aaKnown RBP1.57□□□□□ -2.16
SUB1-204ENST00000504016 RORBQ92753 470 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 METTL26Q96S19 204 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 VAT1Q99536 393 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 DCUN1D5Q9BTE7 237 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 TMED9Q9BVK6 235 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 CHID1Q9BWS9 393 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 CHRNA10Q9GZZ6 450 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 PRORYQ9H606 182 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 TMBIM4Q9HC24 238 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 RMND1Q9NWS8 449 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 USE1Q9NZ43 259 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 PRO0628Q9UI54 55 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 ENPP5Q9UJA9 477 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 USH1CQ9Y6N9 552 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 URGCP-MRPS24S4R325 110 aa1.57□□□□□ -2.16
SUB1-204ENST00000504016 FCGBPQ9Y6R7 5405 aaPredicted RBP1.56□□□□□ -2.16
SUB1-204ENST00000504016 FAM240AA0A1B0GVK7 77 aa1.56□□□□□ -2.16
SUB1-204ENST00000504016 GOLGA6L10A6NI86 522 aa1.56□□□□□ -2.16
SUB1-204ENST00000504016 C9JQL5 133 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms