RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 NKAPLQ5M9Q1 402 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 METAP1DQ6UB28 335 aaPredicted RBP15.23■□□□□ 0.03
TSSC4-210ENST00000496468 C17orf107Q6ZR85 190 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 FGFRL1Q8N441 504 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 OR5H6Q8NGV6 325 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 ACOT12Q8WYK0 555 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 H1FXQ92522 213 aaKnown RBP15.23■□□□□ 0.03
TSSC4-210ENST00000496468 POM121Q96HA1 1249 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 DCUN1D5Q9BTE7 237 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 DPCDQ9BVM2 203 aaPredicted RBP15.23■□□□□ 0.03
TSSC4-210ENST00000496468 RHBDL2Q9NX52 303 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 RCC2Q9P258 522 aaKnown RBP15.23■□□□□ 0.03
TSSC4-210ENST00000496468 SPATA2Q9UM82 520 aa15.23■□□□□ 0.03
TSSC4-210ENST00000496468 ABCA2Q9BZC7 2435 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 A0A0A6YYD4 124 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 KIAA1324LA8MWY0 1029 aaPredicted RBP15.22■□□□□ 0.03
TSSC4-210ENST00000496468 B4DSR2 109 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 MSMBP08118 114 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 ZNF16P17020 682 aaPredicted RBP15.22■□□□□ 0.03
TSSC4-210ENST00000496468 DYNC1I2Q13409 638 aaKnown RBP15.22■□□□□ 0.03
TSSC4-210ENST00000496468 EDDM3AQ14507 147 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 ATXN7L3Q14CW9 347 aaPredicted RBP15.22■□□□□ 0.03
TSSC4-210ENST00000496468 FOXB2Q5VYV0 432 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 RAB12Q6IQ22 244 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 GDPD3Q7L5L3 318 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 LINC01356Q8N9X3 169 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 SUMF2Q8NBJ7 301 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 OR4S1Q8NGB4 309 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 OR56B1Q8NGI3 324 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 NEK7Q8TDX7 302 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 SLC25A38Q96DW6 304 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 C1orf159Q96HA4 380 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 C18orf12Q96KH6 178 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 NEDD4LQ96PU5 975 aa15.22■□□□□ 0.03
TSSC4-210ENST00000496468 METTL21EPA6NDL7 271 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 MGST3O14880 152 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 GPR37O15354 613 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 CSN2P05814 226 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 KCNJ3P48549 501 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 VEGFCP49767 419 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 UBE2NLQ5JXB2 153 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 MZT2AQ6P582 158 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 SAMD12Q8N8I0 201 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 OR5D13Q8NGL4 314 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 DGCR14Q96DF8 476 aaKnown RBP15.21■□□□□ 0.03
TSSC4-210ENST00000496468 SHARPINQ9H0F6 387 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 ATG5Q9H1Y0 275 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 COMMD3Q9UBI1 195 aa15.21■□□□□ 0.03
TSSC4-210ENST00000496468 MAP1AP78559 2803 aaPredicted RBP15.21■□□□□ 0.02
TSSC4-210ENST00000496468 FLNAP21333 2647 aaKnown RBP15.2■□□□□ 0.02
TSSC4-210ENST00000496468 LOC105371242A0A075B767 164 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 C22orf46C9J442 243 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 SCGNO76038 276 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 FUT3P21217 361 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 ZFP36P26651 326 aaKnown RBP15.2■□□□□ 0.02
TSSC4-210ENST00000496468 CHATP28329 748 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 BLVRBP30043 206 aaPredicted RBP15.2■□□□□ 0.02
TSSC4-210ENST00000496468 EDDM3BP56851 147 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 CD276Q5ZPR3 534 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 SIGIRRQ6IA17 410 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 BTN2A1Q7KYR7 527 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 BPIFB2Q8N4F0 458 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 FAM89BQ8N5H3 189 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 BATF3Q9NR55 127 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 PEX16Q9Y5Y5 336 aa15.2■□□□□ 0.02
TSSC4-210ENST00000496468 CELSR1Q9NYQ6 3014 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 TRBV23-1A0A0A0MS06 115 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 MCRIP1C9JLW8 97 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 SOCS1O15524 211 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 ENSAO43768 121 aaKnown RBP15.19■□□□□ 0.02
TSSC4-210ENST00000496468 ECDO95905 644 aaPredicted RBP15.19■□□□□ 0.02
TSSC4-210ENST00000496468 INHBBP09529 407 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 CD99P14209 185 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 P2RX3P56373 397 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 RBM39Q14498 530 aaKnown RBP15.19■□□□□ 0.02
TSSC4-210ENST00000496468 C11orf91Q3C1V1 193 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 CYB5R2Q6BCY4 276 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 BIVMQ86UB2 503 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 GLCCI1Q86VQ1 547 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 PHF21AQ96BD5 680 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 MSI2Q96DH6 328 aaKnown RBP15.19■□□□□ 0.02
TSSC4-210ENST00000496468 DCTN5Q9BTE1 182 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 ING3Q9NXR8 418 aa15.19■□□□□ 0.02
TSSC4-210ENST00000496468 POLR3KQ9Y2Y1 108 aaPredicted RBP15.19■□□□□ 0.02
TSSC4-210ENST00000496468 TRAV20A0A0B4J274 112 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 IGHV2-70DA0A0C4DH43 119 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 A0A1W2PQ09 198 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 FUOMA2VDF0 154 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 FOXI3A8MTJ6 420 aaPredicted RBP15.18■□□□□ 0.02
TSSC4-210ENST00000496468 GLAP06280 429 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 RPL31P62899 125 aaKnown RBP15.18■□□□□ 0.02
TSSC4-210ENST00000496468 MOGAT2Q3SYC2 334 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 KRBOX4Q5JUW0 171 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 BRICD5Q6PL45 260 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 C6orf201Q7Z4U5 140 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 FAM185AQ8N0U4 392 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 OR4M1Q8NGD0 313 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 OR10R2Q8NGX6 335 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 RAB3CQ96E17 227 aa15.18■□□□□ 0.02
TSSC4-210ENST00000496468 TMUB1Q9BVT8 246 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms