RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 GLIPR1P48060 266 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 MTNR1BP49286 362 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 KRTAP10-3P60369 221 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 AESQ08117 197 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 ST3GAL4Q11206 333 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 LDLRAD2Q5SZI1 272 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 LAIR2Q6ISS4 152 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 AHSA2Q719I0 299 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 PXT1Q8NFP0 134 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 OR10K1Q8NGX5 313 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 GAL3ST2Q9H3Q3 398 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 ING3Q9NXR8 418 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 ZNF281Q9Y2X9 895 aa14.37□□□□□ -0.11
ITGB1-215ENST00000488494 UBE2J1Q9Y385 318 aaPredicted RBP14.37□□□□□ -0.11
ITGB1-215ENST00000488494 ODAMA1E959 279 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 FUOMA2VDF0 154 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 H0YJX3 145 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 DEGS1O15121 323 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 CHST1O43916 411 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 MMP23AO75900 390 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 TSPAN9O75954 239 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 CSN2P05814 226 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 LMO1P25800 156 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 RSU1Q15404 277 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 FAM189A2Q15884 450 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 SSX2Q16385 188 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 DDI2Q5TDH0 399 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 DMKNQ6E0U4 476 aaPredicted RBP14.36□□□□□ -0.11
ITGB1-215ENST00000488494 ZNF485Q8NCK3 441 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 OR4C13Q8NGP0 309 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 GHSRQ92847 366 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 ORAI1Q96D31 301 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 COQ2Q96H96 371 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 NR1H4Q96RI1 486 aaPredicted RBP14.36□□□□□ -0.11
ITGB1-215ENST00000488494 TMEM133Q9H2Q1 129 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 TMEM138Q9NPI0 162 aa14.36□□□□□ -0.11
ITGB1-215ENST00000488494 CNOT2Q9NZN8 540 aaKnown RBP14.36□□□□□ -0.11
ITGB1-215ENST00000488494 TRBV5-5A0A0J9YX44 114 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 PNMA8CA0A1B0GUJ8 204 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 VGLL3A8MV65 326 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 GABRA5P31644 462 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 PIGYQ3MUY2 71 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 PAN3Q58A45 887 aaKnown RBP14.35□□□□□ -0.11
ITGB1-215ENST00000488494 KRBOX4Q5JUW0 171 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 ELP2Q6IA86 826 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 BAIAP2L2Q6UXY1 529 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 LIAT1Q6ZQX7 453 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 PIFOQ8TCI5 191 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 FBLIM1Q8WUP2 373 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 PGLYRP3Q96LB9 341 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 CLEC7AQ9BXN2 247 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 PPIL3Q9H2H8 161 aaKnown RBP14.35□□□□□ -0.11
ITGB1-215ENST00000488494 RAB18Q9NP72 206 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 PSORS1C1Q9UIG5 152 aa14.35□□□□□ -0.11
ITGB1-215ENST00000488494 FAM172BPA6NC97 362 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 MYL12BO14950 172 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 CDRT1O95170 752 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 CDK2P24941 298 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 PTGFRP43088 359 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 RIPK1Q13546 671 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 YIF1BQ5BJH7 314 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 SLC35E4Q6ICL7 350 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 TREML4Q6UXN2 200 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 STX19Q8N4C7 294 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 BPIFB6Q8NFQ5 453 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 NDNFQ8TB73 568 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 MALSU1Q96EH3 234 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 ABCB10Q9NRK6 738 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 NKX1-2Q9UD57 310 aaPredicted RBP14.34□□□□□ -0.11
ITGB1-215ENST00000488494 SIGLEC9Q9Y336 463 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 HILPDAQ9Y5L2 63 aa14.34□□□□□ -0.11
ITGB1-215ENST00000488494 TRAV24A0A0B4J272 114 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 MAGEA13PA6NCF6 341 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 ALDOBP05062 364 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 JUNBP17275 347 aaPredicted RBP14.33□□□□□ -0.12
ITGB1-215ENST00000488494 BDKRB2P30411 391 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 ZNF93P35789 620 aaPredicted RBP14.33□□□□□ -0.12
ITGB1-215ENST00000488494 GDNFP39905 211 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 GLP1RP43220 463 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 RAB13P51153 203 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 TAS2R43P59537 309 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 RPS11P62280 158 aaKnown RBP eCLIP14.33□□□□□ -0.12
ITGB1-215ENST00000488494 DOC2BQ14184 412 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 IL13RA2Q14627 380 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 Q499Y3 187 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 MINOS1Q5TGZ0 78 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 HEPN1Q6WQI6 88 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 TMEM219Q86XT9 240 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 OR51T1Q8NGJ9 327 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 OR14A2Q96R54 314 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 NPFFR1Q9GZQ6 430 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 DCLRE1BQ9H816 532 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 TCF7L1Q9HCS4 588 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 TAS2R3Q9NYW6 316 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 CKLFQ9UBR5 152 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 TCF19Q9Y242 345 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 MINOS1-NBL1R4GNA1 71 aa14.33□□□□□ -0.12
ITGB1-215ENST00000488494 TRAV8-7A0A075B6U6 113 aa14.32□□□□□ -0.12
ITGB1-215ENST00000488494 F2RL2O00254 374 aa14.32□□□□□ -0.12
ITGB1-215ENST00000488494 HTR3BO95264 441 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms