RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RFX2P48378 723 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 GBX2P52951 348 aaPredicted RBP9.23□□□□□ -0.93
TRIM56-204ENST00000487252 CAV3P56539 151 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 PRSS12P56730 875 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 SCN1BQ07699 218 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 INSL4Q14641 139 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 PCK2Q16822 640 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 MICBQ29980 383 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 ALG10Q5BKT4 473 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 LRRC10Q5BKY1 277 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 RPL22L1Q6P5R6 122 aaKnown RBP9.23□□□□□ -0.93
TRIM56-204ENST00000487252 FAM131AQ6UXB0 335 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 SLC16A9Q7RTY1 509 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 SLC26A10Q8NG04 563 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 IL17DQ8TAD2 202 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 Q96M85 177 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 ALG12Q9BV10 488 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 PPIL3Q9H2H8 161 aaKnown RBP9.23□□□□□ -0.93
TRIM56-204ENST00000487252 RERGLQ9H628 205 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 COPS3Q9UNS2 423 aa9.23□□□□□ -0.93
TRIM56-204ENST00000487252 A0A1W2PQ09 198 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 FAM90A22PA8MWA6 464 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 BLOC1S5-TXNDC5H3BN57 136 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 LDLRAD4O15165 306 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 SLC25A17O43808 307 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 GMDSO60547 372 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 HPGDSO60760 199 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 GATBO75879 557 aaKnown RBP9.22□□□□□ -0.93
TRIM56-204ENST00000487252 HCKP08631 526 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 UCHL1P09936 223 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 PYCR1P32322 319 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
TRIM56-204ENST00000487252 HCCSP53701 268 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 CTXN1P60606 82 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 RPS11P62280 158 aaKnown RBP eCLIP9.22□□□□□ -0.93
TRIM56-204ENST00000487252 MRPL28Q13084 256 aaKnown RBP9.22□□□□□ -0.93
TRIM56-204ENST00000487252 IKZF1Q13422 519 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 GK2Q14410 553 aaPredicted RBP9.22□□□□□ -0.93
TRIM56-204ENST00000487252 TP53I3Q53FA7 332 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 LDLRAD2Q5SZI1 272 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 CNIH2Q6PI25 160 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 NANOGNBQ7Z5D8 188 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 KCTD20Q7Z5Y7 419 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 CEACAM19Q7Z692 300 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 MKXQ8IYA7 352 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 OSR2Q8N2R0 312 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 OR1F12Q8NHA8 337 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 HAVCR2Q8TDQ0 301 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 H1FXQ92522 213 aaKnown RBP9.22□□□□□ -0.93
TRIM56-204ENST00000487252 GHSRQ92847 366 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 SMIM19Q96E16 107 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 RAX2Q96IS3 184 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 MNTQ99583 582 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 SLC22A4Q9H015 551 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 WDR76Q9H967 626 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 ADAM30Q9UKF2 790 aa9.22□□□□□ -0.93
TRIM56-204ENST00000487252 SMIM30A4D0T7 59 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 SELENOFO60613 162 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 TMEM127O75204 238 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 RHBDL1O75783 438 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 LY6G6CO95867 125 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 HIST1H2ABP04908 130 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 SNRNP70P08621 437 aaKnown RBP9.21□□□□□ -0.94
TRIM56-204ENST00000487252 MED14OSP0DP75 135 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 CA6P23280 308 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 MYL9P24844 172 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 AZGP1P25311 298 aaKnown RBP9.21□□□□□ -0.94
TRIM56-204ENST00000487252 NAA10P41227 235 aaPredicted RBP9.21□□□□□ -0.94
TRIM56-204ENST00000487252 GUCA1AP43080 201 aaPredicted RBP9.21□□□□□ -0.94
TRIM56-204ENST00000487252 OR8G1Q15617 311 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 ACSM3Q53FZ2 586 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 MESTQ5EB52 335 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 STUMQ69YW2 141 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 HIST3H2AQ7L7L0 130 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 NRARPQ7Z6K4 114 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 C11orf53Q8IXP5 236 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 TIGD4Q8IY51 512 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 HIST1H2ACQ93077 130 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 MALSU1Q96EH3 234 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 DNTTIP1Q9H147 329 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 HEXA-AS1Q9H8Q6 139 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 EMC7Q9NPA0 242 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 INIPQ9NRY2 104 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 ZFP57Q9NU63 452 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 COMMD3Q9UBI1 195 aa9.21□□□□□ -0.94
TRIM56-204ENST00000487252 NOP16Q9Y3C1 178 aaKnown RBP9.21□□□□□ -0.94
TRIM56-204ENST00000487252 PRR32B1ATL7 298 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 SEC14L6B5MCN3 397 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 CCL24O00175 119 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 PLA2G10O15496 165 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 ARL6IP5O75915 188 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 ELK1P19419 428 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 LGALS4P56470 323 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 CD300CQ08708 224 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 ECH1Q13011 328 aa9.2□□□□□ -0.94
TRIM56-204ENST00000487252 RSPO1Q2MKA7 263 aaPredicted RBP9.2□□□□□ -0.94
TRIM56-204ENST00000487252 CCDC92Q53HC0 331 aaPredicted RBP9.2□□□□□ -0.94
TRIM56-204ENST00000487252 PYDC2Q56P42 97 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms