RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NMNAT1Q9HAN9 279 aaPredicted RBP5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SPAG4Q9NPE6 437 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 BIN3Q9NQY0 253 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF391Q9UJN7 358 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SLC7A11Q9UPY5 501 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 SLC35A3Q9Y2D2 325 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 KCNE3Q9Y6H6 103 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 V9GYY9 64 aa5.72□□□□□ -1.49
HDAC3-209ENST00000486618 TMED7-TICAM2A0A0A6YYA0 188 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 A0A0G2JMP0 313 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 A0A0X1KG70 313 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 SMIM31A0A1B0GVY4 71 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 A0A1W2PRF3 423 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 A0A1W2PRM7 423 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 G3V2T6 193 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 BLOC1S5-TXNDC5H3BN57 136 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 J3QLI3 93 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 M0R233 179 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 AZIN1O14977 448 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 PPIHO43447 177 aaKnown RBP5.71□□□□□ -1.5
HDAC3-209ENST00000486618 UGT2B17O75795 530 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 GASTP01350 101 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 IGKV3-15P01624 115 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 ORM1P02763 201 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 RAP2AP10114 183 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 GP9P14770 177 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 C4BPBP20851 252 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 GABRA5P31644 462 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 OR3A1P47881 315 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 ATP1B3P54709 279 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 RAG2P55895 527 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 RANP62826 216 aaKnown RBP5.71□□□□□ -1.5
HDAC3-209ENST00000486618 UBA52P62987 128 aaKnown RBP5.71□□□□□ -1.5
HDAC3-209ENST00000486618 MAD2L1Q13257 205 aaPredicted RBP5.71□□□□□ -1.5
HDAC3-209ENST00000486618 TPBGQ13641 420 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 EXOSC2Q13868 293 aaKnown RBP5.71□□□□□ -1.5
HDAC3-209ENST00000486618 MPPED2Q15777 294 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 ATP6AP1Q15904 470 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 CNPY1Q3B7I2 92 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 FAM153CQ494X1 144 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 ATP6AP1LQ52LC2 224 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 ESCO2Q56NI9 601 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 FAM90A2PQ658T7 463 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 ACSM5Q6NUN0 579 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 BTNL8Q6UX41 500 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 CREB3L2Q70SY1 520 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 C1QL2Q7Z5L3 287 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 DHDDSQ86SQ9 333 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 WDFY1Q8IWB7 410 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 RIMKLAQ8IXN7 391 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 ZDHHC22Q8N966 263 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 LFNGQ8NES3 379 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 SDR9C7Q8NEX9 313 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 OR4M2Q8NGB6 313 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 OR8J3Q8NGG0 315 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 OR1L6Q8NGR2 347 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 OR10X1Q8NGY0 326 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 OR4Q3Q8NH05 313 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 TLCD1Q96CP7 247 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 LGALS12Q96DT0 336 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 OR5B12Q96R08 314 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 SLC6A7Q99884 636 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 NDUFAF3Q9BU61 184 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 PTDSS2Q9BVG9 487 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 GGACTQ9BVM4 153 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 MED29Q9NX70 200 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 NLKQ9UBE8 527 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 PYCARDQ9ULZ3 195 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 SLC45A2Q9UMX9 530 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 MYRFQ9Y2G1 1151 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 TMED7Q9Y3B3 224 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 RAP2CQ9Y3L5 183 aa5.71□□□□□ -1.5
HDAC3-209ENST00000486618 IGHV2OR16-5A0A0B4J2B6 119 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 hCG_38984A0A1B0GV85 526 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 A0A1W2PPE3 182 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 UBDO15205 165 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 LYPLA1O75608 230 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 C6orf47O95873 294 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 OR8U9P0C7N5 309 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 LINC00032P0C843 101 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 LAMP1P11279 417 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 BCKDHAP12694 445 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 FUT3P21217 361 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 MATN1P21941 496 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 GATA3P23771 443 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 COL8A2P25067 703 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 RPL35P42766 123 aaKnown RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 RBP2P50120 134 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 POLR2HP52434 150 aaKnown RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 PTTG1IPP53801 180 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 LMO4P61968 165 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 DBPQ10586 325 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 ST3GAL3Q11203 375 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 MLLT11Q13015 90 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 GRK1Q15835 563 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 CYP51A1Q16850 503 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 ARHGAP11BQ3KRB8 267 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 SLC22A6Q4U2R8 563 aa5.7□□□□□ -1.5
HDAC3-209ENST00000486618 RFTN2Q52LD8 501 aaPredicted RBP5.7□□□□□ -1.5
HDAC3-209ENST00000486618 RNASE10Q5GAN6 216 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms