RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 NPY4RP50391 375 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 RORCP51449 518 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 SCAND1P57086 179 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 LCN2P80188 198 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 PLA2G7Q13093 441 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 PAN3Q58A45 887 aaKnown RBP12.72□□□□□ -0.37
SEC13-215ENST00000477547 METAP1DQ6UB28 335 aaPredicted RBP12.72□□□□□ -0.37
SEC13-215ENST00000477547 ZNF841Q6ZN19 808 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 MRI1Q9BV20 369 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 TM2D1Q9BX74 207 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 CHST6Q9GZX3 395 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 LPAR5Q9H1C0 372 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 CCDC59Q9P031 241 aaKnown RBP12.72□□□□□ -0.37
SEC13-215ENST00000477547 STAB1Q9NY15 2570 aa12.72□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A10PA6NDY2 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A18PA6NE21 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A16PA6NEW6 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A20PA6NIJ5 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A8PA6NJQ4 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A7PA6NKC0 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A22PA8MWA6 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A12PA8MX19 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A5PA8MXJ8 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A23PA8MXZ1 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FOXH1O75593 365 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 TK1P04183 234 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 MSMBP08118 114 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A15PP0C7V4 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A13PP0C7W8 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A14PP0C7W9 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM90A24PP0C7X0 464 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 RAB6AP20340 208 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 SOX6P35712 828 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 OR3A1P47881 315 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 GZMKP49863 264 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 EFNB2P52799 333 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 EDDM3AQ14507 147 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 ATXN7L3Q14CW9 347 aaPredicted RBP12.71□□□□□ -0.37
SEC13-215ENST00000477547 GRK1Q15835 563 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 NKAPLQ5M9Q1 402 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 ATAD3CQ5T2N8 411 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 C17orf107Q6ZR85 190 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 OR8H2Q8N162 312 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 OR5H6Q8NGV6 325 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 DYNC2LI1Q8TCX1 351 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 H1FXQ92522 213 aaKnown RBP12.71□□□□□ -0.37
SEC13-215ENST00000477547 AP3S1Q92572 193 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
SEC13-215ENST00000477547 SNX22Q96L94 193 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 FAM234AQ9H0X4 552 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 IFT22Q9H7X7 185 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 SPACA1Q9HBV2 294 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 NDUFA13Q9P0J0 144 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 RAB22AQ9UL26 194 aa12.71□□□□□ -0.37
SEC13-215ENST00000477547 A0A0A6YYD4 124 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 TRAV24A0A0B4J272 114 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 B4DSR2 109 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 INAFM1C9JVW0 142 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 K7N7A8 449 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 LMO1P25800 156 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 KIAA2026Q5HYC2 2103 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 RAB12Q6IQ22 244 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 GDPD3Q7L5L3 318 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 LINC01356Q8N9X3 169 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 OR4S1Q8NGB4 309 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 NEK7Q8TDX7 302 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 PTX4Q96A99 478 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 C1orf159Q96HA4 380 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 DPCDQ9BVM2 203 aaPredicted RBP12.7□□□□□ -0.38
SEC13-215ENST00000477547 RHBDL2Q9NX52 303 aa12.7□□□□□ -0.38
SEC13-215ENST00000477547 RCC2Q9P258 522 aaKnown RBP12.7□□□□□ -0.38
SEC13-215ENST00000477547 ATRQ13535 2644 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 C22orf46C9J442 243 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 MGST3O14880 152 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 PDCD6O75340 191 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 ZNF182P17025 639 aaPredicted RBP12.69□□□□□ -0.38
SEC13-215ENST00000477547 ZFP36P26651 326 aaKnown RBP12.69□□□□□ -0.38
SEC13-215ENST00000477547 VEGFCP49767 419 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 FAM189A2Q15884 450 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 FOXB2Q5VYV0 432 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 SUMF2Q8NBJ7 301 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 MSI2Q96DH6 328 aaKnown RBP12.69□□□□□ -0.38
SEC13-215ENST00000477547 SLC25A38Q96DW6 304 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 NEDD4LQ96PU5 975 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 ATG5Q9H1Y0 275 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 SPATA2Q9UM82 520 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 TLN2Q9Y4G6 2542 aa12.69□□□□□ -0.38
SEC13-215ENST00000477547 METTL21EPA6NDL7 271 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 H3BUI4 141 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 GPR37O15354 613 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 CSN2P05814 226 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 CHATP28329 748 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 BLVRBP30043 206 aaPredicted RBP12.68□□□□□ -0.38
SEC13-215ENST00000477547 EDDM3BP56851 147 aa12.68□□□□□ -0.38
SEC13-215ENST00000477547 UBE2NLQ5JXB2 153 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms